DRSC/TRiP Functional Genomics Resources

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Protein Alignment TpnC4 and calm1

DIOPT Version :10

Sequence 1:NP_610173.2 Gene:TpnC4 / 35498 FlyBaseID:FBgn0033027 Length:153 Species:Drosophila melanogaster
Sequence 2:NP_001008160.1 Gene:calm1 / 493522 XenbaseID:XB-GENE-1014640 Length:149 Species:Xenopus tropicalis


Alignment Length:152 Identity:56/152 - (36%)
Similarity:96/152 - (63%) Gaps:5/152 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MADGEYDKEQLRILRNAFKAFDHDGAGSIEHADVSSILEILGQKLEPPAVKALIKEVDKGTTGKL 65
            ||| :..:||:...:.||..||.||.|:|...::.:::..|||......::.:|.|||....|.:
 Frog     1 MAD-QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64

  Fly    66 DFSQFCKLAARFIEVEEDVGALQNELKEAFRVYDKEGKGYLTVATLRGILHELDDKLSNQDLDMI 130
            ||.:|..:.||.::..:.    :.|::|||||:||:|.||::.|.||.::..|.:||:::::|.:
 Frog    65 DFPEFLTMMARKMKDTDS----EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 125

  Fly   131 IEEIDADGSGTVDFDEFMQVMT 152
            |.|.|.||.|.|:::||:|:||
 Frog   126 IREADIDGDGQVNYEEFVQMMT 147

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TpnC4NP_610173.2 PTZ00184 1..152 CDD:185504 54/150 (36%)
calm1NP_001008160.1 PTZ00184 1..149 CDD:185504 56/152 (37%)

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