DRSC/TRiP Functional Genomics Resources

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Protein Alignment TpnC4 and MYL6

DIOPT Version :9

Sequence 1:NP_001163055.1 Gene:TpnC4 / 35498 FlyBaseID:FBgn0033027 Length:153 Species:Drosophila melanogaster
Sequence 2:NP_066299.2 Gene:MYL6 / 4637 HGNCID:7587 Length:151 Species:Homo sapiens


Alignment Length:155 Identity:38/155 - (24%)
Similarity:83/155 - (53%) Gaps:12/155 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 EYDKEQLRILRNAFKAFDHDGAGSIEHADVSSILEILGQKLEPPAVKALIK-----EVDKGTTGK 64
            ::.::|....:.||:.||..|.|.|.::....::..|||.   |....::|     :.|:.....
Human     3 DFTEDQTAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQN---PTNAEVLKVLGNPKSDEMNVKV 64

  Fly    65 LDFSQFCKLAARFIEVEEDVGALQNELKEAFRVYDKEGKGYLTVATLRGILHELDDKLSNQDLDM 129
            |||..|..: .:.:...:|.|..::.: |..||:||||.|.:..|.:|.:|..|.:|::.::::|
Human    65 LDFEHFLPM-LQTVAKNKDQGTYEDYV-EGLRVFDKEGNGTVMGAEIRHVLVTLGEKMTEEEVEM 127

  Fly   130 IIEEIDADGSGTVDFDEFMQ-VMTG 153
            ::...: |.:|.::::.|:: :::|
Human   128 LVAGHE-DSNGCINYEAFVRHILSG 151

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TpnC4NP_001163055.1 PTZ00184 1..152 CDD:185504 37/152 (24%)
EFh 14..75 CDD:238008 17/65 (26%)
EFh 90..152 CDD:238008 17/62 (27%)
MYL6NP_066299.2 PTZ00184 5..150 CDD:185504 37/150 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1470794at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.010

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