DRSC/TRiP Functional Genomics Resources

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Protein Alignment TpnC4 and MYL1

DIOPT Version :9

Sequence 1:NP_001163055.1 Gene:TpnC4 / 35498 FlyBaseID:FBgn0033027 Length:153 Species:Drosophila melanogaster
Sequence 2:NP_524144.1 Gene:MYL1 / 4632 HGNCID:7582 Length:194 Species:Homo sapiens


Alignment Length:151 Identity:38/151 - (25%)
Similarity:71/151 - (47%) Gaps:13/151 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 EYDKEQLRILRNAFKAFDHDGAGSIEHADVSSILEILGQKLEPPAVKALIKEV------DKGTTG 63
            |:.|||....:.||..||..|...|..:.|..:|..||..    ...|.:::|      ::....
Human    46 EFSKEQQDEFKEAFLLFDRTGDSKITLSQVGDVLRALGTN----PTNAEVRKVLGNPSNEELNAK 106

  Fly    64 KLDFSQFCKLAARFIEVEEDVGALQNELKEAFRVYDKEGKGYLTVATLRGILHELDDKLSNQDLD 128
            |::|.||..:.......::.  |...:..|..||:||||.|.:..|.||.:|..|.:|:..::::
Human   107 KIEFEQFLPMMQAISNNKDQ--ATYEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMKEEEVE 169

  Fly   129 MIIEEIDADGSGTVDFDEFMQ 149
            .::.. ..|.:|.::::.|::
Human   170 ALMAG-QEDSNGCINYEAFVK 189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TpnC4NP_001163055.1 PTZ00184 1..152 CDD:185504 38/151 (25%)
EFh 14..75 CDD:238008 16/66 (24%)
EFh 90..152 CDD:238008 17/60 (28%)
MYL1NP_524144.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..35
PTZ00184 45..193 CDD:185504 38/151 (25%)
EFh 54..118 CDD:298682 16/67 (24%)
EF-hand_6 54..83 CDD:290141 8/28 (29%)
EFh 131..192 CDD:238008 17/60 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1470794at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.010

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