DRSC/TRiP Functional Genomics Resources

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Protein Alignment TpnC4 and cabp1a

DIOPT Version :10

Sequence 1:NP_610173.2 Gene:TpnC4 / 35498 FlyBaseID:FBgn0033027 Length:153 Species:Drosophila melanogaster
Sequence 2:NP_001315294.1 Gene:cabp1a / 449789 ZFINID:ZDB-GENE-041010-36 Length:379 Species:Danio rerio


Alignment Length:151 Identity:44/151 - (29%)
Similarity:81/151 - (53%) Gaps:5/151 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 EYDKEQLRILRNAFKAFDHDGAGSIEHADVSSILEILGQKLEPPAVKALIKEVDKGTTGKLDFSQ 69
            |...|::..||:|||.||.|..|.|...|:.:.:..:|.......:..|.::::....|.:||..
Zfish   230 ELRPEEIDELRDAFKEFDKDKDGFISCKDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFED 294

  Fly    70 FCKLAA--RFIEVEEDVGALQNELKEAFRVYDKEGKGYLTVATLRGILHE-LDDKLSNQDLDMII 131
            |.:|..  ...|..:.:|.  .||:.||:.:|..|.|.::...||..:.: |..::.::||:.|:
Zfish   295 FVELMGPKLLAETADMIGI--KELRNAFKEFDTNGDGEISTGELREAMRKLLGQQVGHRDLEDIL 357

  Fly   132 EEIDADGSGTVDFDEFMQVMT 152
            .:||.:|.|.|||:||:::::
Zfish   358 RDIDLNGDGRVDFEEFVRMVS 378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TpnC4NP_610173.2 PTZ00184 1..152 CDD:185504 44/149 (30%)
cabp1aNP_001315294.1 PTZ00184 230..377 CDD:185504 44/148 (30%)

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