DRSC/TRiP Functional Genomics Resources

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Protein Alignment TpnC4 and cabp1b

DIOPT Version :10

Sequence 1:NP_610173.2 Gene:TpnC4 / 35498 FlyBaseID:FBgn0033027 Length:153 Species:Drosophila melanogaster
Sequence 2:NP_001002414.1 Gene:cabp1b / 436687 ZFINID:ZDB-GENE-040718-111 Length:167 Species:Danio rerio


Alignment Length:151 Identity:46/151 - (30%)
Similarity:82/151 - (54%) Gaps:5/151 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 EYDKEQLRILRNAFKAFDHDGAGSIEHADVSSILEILGQKLEPPAVKALIKEVDKGTTGKLDFSQ 69
            |...|::..||.|||.||.|..|.|...|:.:.:..:|.......:..|.::::....|.:||..
Zfish    18 ELRPEEMDELREAFKEFDKDKDGFIGCKDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFED 82

  Fly    70 FCKLAA--RFIEVEEDVGALQNELKEAFRVYDKEGKGYLTVATLRGILHE-LDDKLSNQDLDMII 131
            |.:|..  ...|..:.:|.  .||::||:.:|..|.|.::.|.||..:.: |..::.::||:.|:
Zfish    83 FVELMGPKLLAETADMIGV--KELRDAFKEFDTNGDGQISTAELREAMKKLLGQQVGHRDLEDIL 145

  Fly   132 EEIDADGSGTVDFDEFMQVMT 152
            .:||.:|.|.|||:||:::|:
Zfish   146 RDIDLNGDGHVDFEEFVRMMS 166

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TpnC4NP_610173.2 PTZ00184 1..152 CDD:185504 45/149 (30%)
cabp1bNP_001002414.1 PTZ00184 18..165 CDD:185504 45/148 (30%)

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