DRSC/TRiP Functional Genomics Resources

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Protein Alignment TpnC4 and myl6

DIOPT Version :9

Sequence 1:NP_001163055.1 Gene:TpnC4 / 35498 FlyBaseID:FBgn0033027 Length:153 Species:Drosophila melanogaster
Sequence 2:NP_989137.1 Gene:myl6 / 394742 XenbaseID:XB-GENE-5931386 Length:151 Species:Xenopus tropicalis


Alignment Length:150 Identity:38/150 - (25%)
Similarity:76/150 - (50%) Gaps:7/150 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 EYDKEQLRILRNAFKAFDHDGAGSIEHADVSSILEILGQKLEPPAVKALI---KEVDKGTTGKLD 66
            :|..:|:...:.:|:.||..|.|.|.......::..|||......|..::   |..|.... .||
 Frog     3 DYSDDQIADYKESFQLFDRVGDGKILFGQCGDVMRALGQNPTNAEVMKVLGNPKPEDMNIK-TLD 66

  Fly    67 FSQFCKLAARFIEVEEDVGALQNELKEAFRVYDKEGKGYLTVATLRGILHELDDKLSNQDLDMII 131
            |.||..: .:.:....||..|: ::.|..||:||||.|.:..:.||.:|..|.:|:::.:::.::
 Frog    67 FEQFLPM-MQTVAKNRDVPGLE-DIIEGLRVFDKEGNGTVMGSELRHVLVSLGEKMTDDEVETLL 129

  Fly   132 EEIDADGSGTVDFDEFMQVM 151
            ...: |.:|.::::|.::.:
 Frog   130 SNHE-DANGCINYEELIRAI 148

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TpnC4NP_001163055.1 PTZ00184 1..152 CDD:185504 38/149 (26%)
EFh 14..75 CDD:238008 17/63 (27%)
EFh 90..152 CDD:238008 16/61 (26%)
myl6NP_989137.1 EFh_PEF 5..146 CDD:330173 37/144 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1470794at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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