DRSC/TRiP Functional Genomics Resources

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Protein Alignment TpnC4 and Cabp4

DIOPT Version :10

Sequence 1:NP_610173.2 Gene:TpnC4 / 35498 FlyBaseID:FBgn0033027 Length:153 Species:Drosophila melanogaster
Sequence 2:XP_038941368.1 Gene:Cabp4 / 365394 RGDID:1306083 Length:278 Species:Rattus norvegicus


Alignment Length:145 Identity:48/145 - (33%)
Similarity:74/145 - (51%) Gaps:3/145 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DGEYDKEQLRILRNAFKAFDHDGAGSIEHADVSSILEILGQKLEPPAVKALIKEVDKGTTGKLDF 67
            |.|...|:|..|:.||:.||.|..|.|.|.::...:..||.......:..:.:.|.....|.:||
  Rat   119 DRELGPEELEELQAAFEEFDTDQDGYIGHRELGDCMRTLGYMPTEMELLEVSQHVKMRMGGFVDF 183

  Fly    68 SQFCKLAARFIEVEEDVGAL-QNELKEAFRVYDKEGKGYLTVATLRGILHE-LDDKLSNQDLDMI 130
            .:|.:|.:..:. ||....| ..||:.|||.:||:..|.:|||.||..... |.:.|...:||.:
  Rat   184 EEFVELISPKLR-EETAHMLGVRELRIAFREFDKDRDGRITVAELRQAAPALLGEPLEGTELDEM 247

  Fly   131 IEEIDADGSGTVDFD 145
            :.::|.:|.||:|||
  Rat   248 LRDMDLNGDGTIDFD 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TpnC4NP_610173.2 PTZ00184 1..152 CDD:185504 48/145 (33%)
Cabp4XP_038941368.1 PTZ00184 133..262 CDD:185504 41/129 (32%)

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