DRSC/TRiP Functional Genomics Resources

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Protein Alignment TpnC4 and Cabp5

DIOPT Version :10

Sequence 1:NP_610173.2 Gene:TpnC4 / 35498 FlyBaseID:FBgn0033027 Length:153 Species:Drosophila melanogaster
Sequence 2:NP_001102377.1 Gene:Cabp5 / 365194 RGDID:1308108 Length:173 Species:Rattus norvegicus


Alignment Length:147 Identity:42/147 - (28%)
Similarity:85/147 - (57%) Gaps:3/147 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 KEQLRILRNAFKAFDHDGAGSIEHADVSSILEILGQKLEPPAVKALIKEVDKGTTGKLDFSQFCK 72
            ::::..||.||..||.|..|.|.:.|:.:::..:|.......:..|.:::.....|::||..|.:
  Rat    27 QDEIDELREAFLEFDKDRDGFISYKDLGNLMRTMGYMPTEMELTELGQQIRMNLGGRVDFEDFVE 91

  Fly    73 LAARFIEVEEDVGAL-QNELKEAFRVYDKEGKGYLTVATLRGILHE-LDDKLSNQDLDMIIEEID 135
            |....: :.|..|.: ..|:::||:.:|..|.|.:|:|.|:..:.. |.:||:.:::..:::|.|
  Rat    92 LMTPKL-LAETAGMIGVQEMRDAFKEFDANGDGEITLAELQQAMQRLLGEKLTPREIAEVVQEAD 155

  Fly   136 ADGSGTVDFDEFMQVMT 152
            .:|.|||||:||:::|:
  Rat   156 INGDGTVDFEEFVKMMS 172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TpnC4NP_610173.2 PTZ00184 1..152 CDD:185504 41/145 (28%)
Cabp5NP_001102377.1 PTZ00184 25..171 CDD:185504 41/144 (28%)

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