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Protein Alignment TpnC4 and Efcab7
DIOPT Version :10
| Sequence 1: | NP_610173.2 |
Gene: | TpnC4 / 35498 |
FlyBaseID: | FBgn0033027 |
Length: | 153 |
Species: | Drosophila melanogaster |
| Sequence 2: | XP_008762107.1 |
Gene: | Efcab7 / 362549 |
RGDID: | 1561825 |
Length: | 647 |
Species: | Rattus norvegicus |
| Alignment Length: | 60 |
Identity: | 23/60 - (38%) |
| Similarity: | 32/60 - (53%) |
Gaps: | 0/60 - (0%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 14 LRNAFKAFDHDGAGSIEHADVSSILEILGQKLEPPAVKALIKEVDKGTTGKLDFSQFCKL 73
|..:||..|.:..|||.|:|:...|...|:|:....|.|:|...|....||.|:.:||||
Rat 126 LLKSFKQLDVNDDGSILHSDLHKYLTKRGEKMTQEEVNAVISLADVNANGKFDYVKFCKL 185
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| TpnC4 | NP_610173.2 |
PTZ00184 |
1..152 |
CDD:185504 |
23/60 (38%) |
| Efcab7 | XP_008762107.1 |
EF-hand_7 |
123..187 |
CDD:463900 |
23/60 (38%) |
| EFh |
426..486 |
CDD:415501 |
|
|
Blue background indicates that the domain is not in
the aligned region.
|
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