DRSC/TRiP Functional Genomics Resources

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Protein Alignment TpnC4 and zgc:153867

DIOPT Version :9

Sequence 1:NP_001163055.1 Gene:TpnC4 / 35498 FlyBaseID:FBgn0033027 Length:153 Species:Drosophila melanogaster
Sequence 2:XP_017209013.1 Gene:zgc:153867 / 337226 ZFINID:ZDB-GENE-030131-9170 Length:209 Species:Danio rerio


Alignment Length:157 Identity:41/157 - (26%)
Similarity:82/157 - (52%) Gaps:12/157 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DGEYDKEQLRILRNAFKAFDHDGAGSIEHADVSSILEILGQKLEPPAVKALIK-----EVDKGTT 62
            :.::.::|:...:.||..||..|.|.|.:.....::..|||.   |....::|     :.::...
Zfish    59 ESDFSEDQILEFKEAFLLFDRTGDGKITYNQCGDVMRALGQN---PVNAEVLKVLGNPKAEEMNH 120

  Fly    63 GKLDFSQFCKLAARFIEVEEDVGALQNELKEAFRVYDKEGKGYLTVATLRGILHELDDKLSNQDL 127
            ..|||.||..: .:.|...:|.|..: :..|..||:||||.|.:..|.||.:|..|.:|::.:::
Zfish   121 KLLDFEQFLPM-LQAIAKNKDQGTFE-DFVEGLRVFDKEGNGTVMGAELRHVLTTLGEKMTEEEV 183

  Fly   128 DMIIEEIDADGSGTVDFDEFMQ-VMTG 153
            :.::...: |.:|.::::|.:: ||:|
Zfish   184 ETLLAGHE-DANGCINYEELVRMVMSG 209

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TpnC4NP_001163055.1 PTZ00184 1..152 CDD:185504 39/154 (25%)
EFh 14..75 CDD:238008 17/65 (26%)
EFh 90..152 CDD:238008 18/62 (29%)
zgc:153867XP_017209013.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1470794at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.010

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