DRSC/TRiP Functional Genomics Resources

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Protein Alignment TpnC4 and myl1

DIOPT Version :10

Sequence 1:NP_610173.2 Gene:TpnC4 / 35498 FlyBaseID:FBgn0033027 Length:153 Species:Drosophila melanogaster
Sequence 2:NP_956294.1 Gene:myl1 / 336165 ZFINID:ZDB-GENE-030131-8109 Length:190 Species:Danio rerio


Alignment Length:150 Identity:39/150 - (26%)
Similarity:73/150 - (48%) Gaps:11/150 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 EYDKEQLRILRNAFKAFDHDGAGSIEHADVSSILEILGQKLEPPAVKALIK-----EVDKGTTGK 64
            ::.::|:...|.||..||..|...:.:..::.|:..|||.   |..|.:.|     ..|.....:
Zfish    42 DFTQDQMEDYREAFLLFDRVGDSKVAYNQIADIMRALGQN---PTNKEVTKILGNPTADDMVNKR 103

  Fly    65 LDFSQFCKLAARFIEVEEDVGALQNELKEAFRVYDKEGKGYLTVATLRGILHELDDKLSNQDLDM 129
            :||..|..:..  :.:.....|..::..|..||:||||.|.:..|.||.:|..|.:|:|..::|.
Zfish   104 VDFEGFLPMLQ--VVINNPNKATYDDYVEGLRVFDKEGNGTVMGAELRIVLSTLGEKMSEAEIDA 166

  Fly   130 IIEEIDADGSGTVDFDEFMQ 149
            :::. ..|.:|.|:::.|::
Zfish   167 LMQG-QEDENGCVNYEAFVK 185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TpnC4NP_610173.2 PTZ00184 1..152 CDD:185504 39/149 (26%)
myl1NP_956294.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..33
PTZ00184 44..189 CDD:185504 39/147 (27%)
Blue background indicates that the domain is not in the aligned region.

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