DRSC/TRiP Functional Genomics Resources

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Protein Alignment TpnC4 and Cabp1

DIOPT Version :10

Sequence 1:NP_610173.2 Gene:TpnC4 / 35498 FlyBaseID:FBgn0033027 Length:153 Species:Drosophila melanogaster
Sequence 2:NP_001297641.1 Gene:Cabp1 / 29867 MGIID:1352750 Length:350 Species:Mus musculus


Alignment Length:147 Identity:43/147 - (29%)
Similarity:81/147 - (55%) Gaps:5/147 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 EQLRILRNAFKAFDHDGAGSIEHADVSSILEILGQKLEPPAVKALIKEVDKGTTGKLDFSQFCKL 73
            |::..||.||:.||.|..|.|...|:.:.:..:|.......:..|.::::....|.:||..|.:|
Mouse   205 EEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVEL 269

  Fly    74 AA--RFIEVEEDVGALQNELKEAFRVYDKEGKGYLTVATLRGILHE-LDDKLSNQDLDMIIEEID 135
            ..  ...|..:.:|.  .||::|||.:|..|.|.::.:.||..:.: |..::.::|::.||.::|
Mouse   270 MGPKLLAETADMIGV--KELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVD 332

  Fly   136 ADGSGTVDFDEFMQVMT 152
            .:|.|.|||:||:::|:
Mouse   333 LNGDGRVDFEEFVRMMS 349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TpnC4NP_610173.2 PTZ00184 1..152 CDD:185504 42/145 (29%)
Cabp1NP_001297641.1 PTZ00184 201..348 CDD:185504 42/144 (29%)

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