DRSC/TRiP Functional Genomics Resources

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Protein Alignment TpnC4 and cam1

DIOPT Version :10

Sequence 1:NP_610173.2 Gene:TpnC4 / 35498 FlyBaseID:FBgn0033027 Length:153 Species:Drosophila melanogaster
Sequence 2:NP_593340.1 Gene:cam1 / 2543039 PomBaseID:SPAC3A12.14 Length:150 Species:Schizosaccharomyces pombe


Alignment Length:144 Identity:49/144 - (34%)
Similarity:87/144 - (60%) Gaps:4/144 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 EQLRILRNAFKAFDHDGAGSIEHADVSSILEILGQKLEPPAVKALIKEVDKGTTGKLDFSQFCKL 73
            ||:...|.||..||.|..|:|...::..::..|||......::.:|.|||....|.:||::|..:
pombe     9 EQIAEFREAFSLFDRDQDGNITSNELGVVMRSLGQSPTAAELQDMINEVDADGNGTIDFTEFLTM 73

  Fly    74 AARFIEVEEDVGALQNELKEAFRVYDKEGKGYLTVATLRGILHELDDKLSNQDLDMIIEEIDADG 138
            .||.::..::    :.|::|||:|:||:|.||:||..|..:|..|.::||.:::..:|.|.|.||
pombe    74 MARKMKDTDN----EEEVREAFKVFDKDGNGYITVEELTHVLTSLGERLSQEEVADMIREADTDG 134

  Fly   139 SGTVDFDEFMQVMT 152
            .|.::::||.:|::
pombe   135 DGVINYEEFSRVIS 148

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TpnC4NP_610173.2 PTZ00184 1..152 CDD:185504 49/142 (35%)
cam1NP_593340.1 PTZ00184 5..150 CDD:185504 49/144 (34%)

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