DRSC/TRiP Functional Genomics Resources

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Protein Alignment TpnC4 and cam2

DIOPT Version :9

Sequence 1:NP_001163055.1 Gene:TpnC4 / 35498 FlyBaseID:FBgn0033027 Length:153 Species:Drosophila melanogaster
Sequence 2:NP_594877.1 Gene:cam2 / 2542611 PomBaseID:SPAC29A4.05 Length:143 Species:Schizosaccharomyces pombe


Alignment Length:142 Identity:44/142 - (30%)
Similarity:69/142 - (48%) Gaps:8/142 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 KEQLRILRNAFKAFDHDGAGSIEHADVSSILEILGQKLEPPAVKALIKEVDKGTTGKLDFSQFCK 72
            |||...::.||..:|.|..|.|..:.|.|:|..||..:....:..|..|:......| .|..|..
pombe     5 KEQTDEMKEAFVLYDIDKDGLIPTSHVGSVLRSLGINVTDAELAKLSNELGDAIDEK-KFMSFVS 68

  Fly    73 LAARFIEVEEDVGALQNELKEAFRVYDKEGKGYLTVATLRGILHELDDKLSNQDLDMIIEEIDAD 137
            ...|..|.||       |..:||||:||:..||:..|.....:..|.:|||:.::.::::|.|..
pombe    69 NKLRETESEE-------EYIKAFRVFDKDNSGYIETAKFADYMKTLGEKLSDNEVQLMVQEADPT 126

  Fly   138 GSGTVDFDEFMQ 149
            .||:.|:.:|:|
pombe   127 NSGSFDYYDFVQ 138

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TpnC4NP_001163055.1 PTZ00184 1..152 CDD:185504 44/142 (31%)
EFh 14..75 CDD:238008 16/60 (27%)
EFh 90..152 CDD:238008 21/60 (35%)
cam2NP_594877.1 FRQ1 1..143 CDD:227455 44/142 (31%)
EFh 10..105 CDD:298682 30/102 (29%)
EFh 79..141 CDD:238008 21/60 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23050
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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