DRSC/TRiP Functional Genomics Resources

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Protein Alignment TpnC4 and Calm1

DIOPT Version :10

Sequence 1:NP_610173.2 Gene:TpnC4 / 35498 FlyBaseID:FBgn0033027 Length:153 Species:Drosophila melanogaster
Sequence 2:XP_063117613.1 Gene:Calm1 / 24242 RGDID:2257 Length:155 Species:Rattus norvegicus


Alignment Length:158 Identity:54/158 - (34%)
Similarity:94/158 - (59%) Gaps:11/158 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MADGEYDKEQLRILRNAFKAFDHDGAGSIEHADVSSILEILGQKLEPPAVKALIKEVDKGTTGKL 65
            ||| :..:||:...:.||..||.||.|:|...::.:::..|||......::.:|.|||....|.:
  Rat     1 MAD-QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64

  Fly    66 DFSQFCKLAARFIEVEEDVGALQNELKEAFRVYDKEGKGYLTVATLRGILHELDDKLSNQDLDMI 130
            ||.:|..:.||.::..:.    :.|::|||||:||:|.||::.|.||.::..|.:||:::::|.:
  Rat    65 DFPEFLTMMARKMKDTDS----EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 125

  Fly   131 IEEIDADGSGTVDFD------EFMQVMT 152
            |.|.|.||.|.|:::      ..:||:|
  Rat   126 IREADIDGDGQVNYEGKGLVFRSLQVVT 153

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TpnC4NP_610173.2 PTZ00184 1..152 CDD:185504 53/156 (34%)
Calm1XP_063117613.1 None

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