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Protein Alignment TpnC4 and Efcab12
DIOPT Version :9
Sequence 1: | NP_001163055.1 |
Gene: | TpnC4 / 35498 |
FlyBaseID: | FBgn0033027 |
Length: | 153 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001103976.1 |
Gene: | Efcab12 / 212516 |
MGIID: | 2681834 |
Length: | 673 |
Species: | Mus musculus |
Alignment Length: | 32 |
Identity: | 7/32 - (21%) |
Similarity: | 16/32 - (50%) |
Gaps: | 0/32 - (0%) |
- Green bases have known domain annotations that are detailed below.
Fly 9 EQLRILRNAFKAFDHDGAGSIEHADVSSILEI 40
|..|::|:..|.||:....:....::..:|.:
Mouse 458 ENCRLVRSGTKEFDNHCLPTTISGEMEELLNV 489
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
TpnC4 | NP_001163055.1 |
PTZ00184 |
1..152 |
CDD:185504 |
7/32 (22%) |
EFh |
14..75 |
CDD:238008 |
5/27 (19%) |
EFh |
90..152 |
CDD:238008 |
|
Efcab12 | NP_001103976.1 |
None |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C167833847 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.930 |
|
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