DRSC/TRiP Functional Genomics Resources

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Protein Alignment TpnC4 and mlc-6

DIOPT Version :10

Sequence 1:NP_610173.2 Gene:TpnC4 / 35498 FlyBaseID:FBgn0033027 Length:153 Species:Drosophila melanogaster
Sequence 2:NP_510375.2 Gene:mlc-6 / 186979 WormBaseID:WBGene00010554 Length:143 Species:Caenorhabditis elegans


Alignment Length:143 Identity:36/143 - (25%)
Similarity:68/143 - (47%) Gaps:18/143 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 RNAFKAFDHDGAGSIEHADVSSILEILGQKLEPPAVKALIKEVDKGTTGKLDFSQFCKLAARF-- 77
            |..|..||..|.|.|:.|.|..:|..|.:..:...|...:.:.||  |.::.|..|..:.:..  
 Worm    11 REVFMLFDKKGDGKIDAAQVFEVLRSLDENPKNSDVHQCLAKFDK--TARISFENFLPVLSHVRN 73

  Fly    78 ----IEVEEDVGALQNELKEAFRVYDKEGKGYLTVATLRGILHELDDKLSNQDLDMIIEEIDADG 138
                ..:|:.:..|.:        :||||:|::|.|.||.:|..:.||||:::.|.::  ...:.
 Worm    74 NKIPYSMEDFIKGLSH--------FDKEGEGFITSAELRQVLTTMGDKLSDEEFDKLV--AGQED 128

  Fly   139 SGTVDFDEFMQVM 151
            :|.:..:.|::.:
 Worm   129 NGKIKIETFVKTI 141

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TpnC4NP_610173.2 PTZ00184 1..152 CDD:185504 36/143 (25%)
mlc-6NP_510375.2 PTZ00184 5..143 CDD:185504 36/143 (25%)

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