DRSC/TRiP Functional Genomics Resources

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Protein Alignment TpnC4 and C50C3.5

DIOPT Version :10

Sequence 1:NP_610173.2 Gene:TpnC4 / 35498 FlyBaseID:FBgn0033027 Length:153 Species:Drosophila melanogaster
Sequence 2:NP_498786.3 Gene:C50C3.5 / 183642 WormBaseID:WBGene00016801 Length:189 Species:Caenorhabditis elegans


Alignment Length:150 Identity:35/150 - (23%)
Similarity:72/150 - (48%) Gaps:15/150 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 EYDKEQLRILRNAFKAFDHDGAGSIEHADVSSILEILGQKLEPPAVKALIKEVDKGTTGKLDFSQ 69
            |..|:::..:...|:..|.||:|:|..::|:.:|..||..:.|..|:|:::..|....|::||.:
 Worm    43 EVSKQEVEKVFKIFQLMDDDGSGTISSSEVAKMLNELGIDVSPKVVQAVMRSSDVSGDGQIDFEE 107

  Fly    70 FCKLAA-----RFIEVEEDVGALQNELKEAFRVYDKEGKGYLTVATLRGILHE-LDDKLSNQDLD 128
            |  |||     :...|:.||..:.:::       |...:..::...|.....| :...::.::..
 Worm   108 F--LAAVTSKIKLSTVKADVQLMLSKI-------DNNPEKVISAEELVVAWSETVSTNITVKEAC 163

  Fly   129 MIIEEIDADGSGTVDFDEFM 148
            .:|::.|..|.|.....||:
 Worm   164 ALIQQADTQGRGKATIHEFI 183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TpnC4NP_610173.2 PTZ00184 1..152 CDD:185504 35/149 (23%)
C50C3.5NP_498786.3 EFh 51..113 CDD:238008 21/63 (33%)
EFh_PI-PLC 54..185 CDD:333715 33/138 (24%)
EF-hand motif 54..80 CDD:320029 8/25 (32%)
EF-hand motif 87..119 CDD:320029 10/33 (30%)
EF-hand motif 124..153 CDD:320029 5/35 (14%)

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