DRSC/TRiP Functional Genomics Resources

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Protein Alignment TpnC4 and Myl4

DIOPT Version :9

Sequence 1:NP_001163055.1 Gene:TpnC4 / 35498 FlyBaseID:FBgn0033027 Length:153 Species:Drosophila melanogaster
Sequence 2:XP_030101494.1 Gene:Myl4 / 17896 MGIID:97267 Length:205 Species:Mus musculus


Alignment Length:179 Identity:41/179 - (22%)
Similarity:78/179 - (43%) Gaps:29/179 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MADGEYDKEQLRI---------------------LRNAFKAFDHDGAG--SIEHADVSSILEILG 42
            :.|..:|.:.::|                     .:.||..||....|  .|.:.....:|..||
Mouse    30 LKDSAFDPKSVKIDFSADQIEVSHLPIGEAVAAEFKEAFSLFDRTPTGEMKITYGQCGDVLRALG 94

  Fly    43 QK-LEPPAVKALIKEVDKGTTGK-LDFSQFCKLAARFIEVEEDVGALQNELKEAFRVYDKEGKGY 105
            |. .....::.|.|...:..:.| |||..|..: .:.|...::.|..: :..|..||:|||..|.
Mouse    95 QNPTNAEVLRVLGKPKPEEMSSKTLDFEMFLPI-LQHISRNKEQGTYE-DFVEGLRVFDKESNGT 157

  Fly   106 LTVATLRGILHELDDKLSNQDLDMIIEEIDADGSGTVDFDEFMQ-VMTG 153
            :..|.||.:|..|.:|:|..:::.::.. ..|.:|.::::.|:: :|:|
Mouse   158 VMGAELRHVLATLGEKMSEAEVEQLLSG-QEDANGCINYEAFVKHIMSG 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TpnC4NP_001163055.1 PTZ00184 1..152 CDD:185504 39/176 (22%)
EFh 14..75 CDD:238008 17/64 (27%)
EFh 90..152 CDD:238008 17/62 (27%)
Myl4XP_030101494.1 PTZ00184 62..204 CDD:185504 36/144 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1470794at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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