DRSC/TRiP Functional Genomics Resources

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Protein Alignment TpnC4 and cal-3

DIOPT Version :10

Sequence 1:NP_610173.2 Gene:TpnC4 / 35498 FlyBaseID:FBgn0033027 Length:153 Species:Drosophila melanogaster
Sequence 2:NP_500421.2 Gene:cal-3 / 177143 WormBaseID:WBGene00000287 Length:234 Species:Caenorhabditis elegans


Alignment Length:145 Identity:37/145 - (25%)
Similarity:80/145 - (55%) Gaps:5/145 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 KEQLRILRNAFKAFDHDGAGSIEHADVSSILEILGQKLEPPAVKALIKEVDKGTTGKLDFSQFCK 72
            :|::...:.||..||.||.|:|...::...:..|||......:..:|.:||....|:::|.:||.
 Worm    95 EEEIHEFKEAFLLFDKDGNGTISIKELGVAMRALGQNPTEQQMMEIIHDVDLDGNGQVEFPEFCV 159

  Fly    73 LAARFIEVEEDVGALQNELKEAFRVYDKEGKGYLTVATLRGILHELDDKLSNQDLDMIIEEIDAD 137
            :..|.:: |.|    ...::|||:::|::|.|.:|....:..:..:.......:::.::.|:|.|
 Worm   160 MMKRIMK-ETD----SEMIREAFKIFDRDGNGVITANEFKLFMINMGMCFDEVEVEEMMNEVDCD 219

  Fly   138 GSGTVDFDEFMQVMT 152
            |:|.:|::||:::.:
 Worm   220 GNGEIDYEEFVKIFS 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TpnC4NP_610173.2 PTZ00184 1..152 CDD:185504 37/143 (26%)
cal-3NP_500421.2 PTZ00184 92..232 CDD:185504 37/141 (26%)

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