DRSC/TRiP Functional Genomics Resources

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Protein Alignment TpnC4 and mlc-5

DIOPT Version :10

Sequence 1:NP_610173.2 Gene:TpnC4 / 35498 FlyBaseID:FBgn0033027 Length:153 Species:Drosophila melanogaster
Sequence 2:NP_499813.1 Gene:mlc-5 / 176796 WormBaseID:WBGene00011734 Length:142 Species:Caenorhabditis elegans


Alignment Length:149 Identity:40/149 - (26%)
Similarity:65/149 - (43%) Gaps:17/149 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 EQLRILRNAFKAFDHDGAGSIEHADVSSILEILGQKLEPPAVKALIKEVDKGTTGKLDFSQFCKL 73
            :.|...|..|..||..|...|....|..:|..|||......:...:...|:  ..:|.|..|..:
 Worm     2 DDLADCREVFAYFDSKGDERISVQQVGDVLRALGQNPTEAEIHKCVGSFDR--EARLSFEDFVPI 64

  Fly    74 AARFIE------VEEDVGALQNELKEAFRVYDKEGKGYLTVATLRGILHELDDKLSNQDLDMIIE 132
            .....:      |||.|..|.:        :||||.|.:.||.||.:|..|.::||::|:|.::.
 Worm    65 FQSVSKNREKHTVEEFVEGLSH--------FDKEGNGMINVAELRHLLTTLGERLSDEDVDQLLS 121

  Fly   133 EIDADGSGTVDFDEFMQVM 151
            ..: |..|.|:..:|::.:
 Worm   122 GHN-DSHGNVNISDFVRAV 139

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TpnC4NP_610173.2 PTZ00184 1..152 CDD:185504 40/149 (27%)
mlc-5NP_499813.1 PTZ00184 2..140 CDD:185504 40/149 (27%)

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