DRSC/TRiP Functional Genomics Resources

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Protein Alignment TpnC4 and Calm1

DIOPT Version :10

Sequence 1:NP_610173.2 Gene:TpnC4 / 35498 FlyBaseID:FBgn0033027 Length:153 Species:Drosophila melanogaster
Sequence 2:NP_001300863.1 Gene:Calm1 / 12313 MGIID:88251 Length:197 Species:Mus musculus


Alignment Length:145 Identity:53/145 - (36%)
Similarity:92/145 - (63%) Gaps:4/145 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 KEQLRILRNAFKAFDHDGAGSIEHADVSSILEILGQKLEPPAVKALIKEVDKGTTGKLDFSQFCK 72
            :||:...:.||..||.||.|:|...::.:::..|||......::.:|.|||....|.:||.:|..
Mouse    55 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 119

  Fly    73 LAARFIEVEEDVGALQNELKEAFRVYDKEGKGYLTVATLRGILHELDDKLSNQDLDMIIEEIDAD 137
            :.||.::..:.    :.|::|||||:||:|.||::.|.||.::..|.:||:::::|.:|.|.|.|
Mouse   120 MMARKMKDTDS----EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 180

  Fly   138 GSGTVDFDEFMQVMT 152
            |.|.|:::||:|:||
Mouse   181 GDGQVNYEEFVQMMT 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TpnC4NP_610173.2 PTZ00184 1..152 CDD:185504 51/143 (36%)
Calm1NP_001300863.1 PTZ00184 50..197 CDD:185504 53/145 (37%)

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