DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TpnC4 and cetn2

DIOPT Version :10

Sequence 1:NP_610173.2 Gene:TpnC4 / 35498 FlyBaseID:FBgn0033027 Length:153 Species:Drosophila melanogaster
Sequence 2:XP_001345066.1 Gene:cetn2 / 100006257 ZFINID:ZDB-GENE-091118-94 Length:172 Species:Danio rerio


Alignment Length:147 Identity:49/147 - (33%)
Similarity:88/147 - (59%) Gaps:4/147 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 EYDKEQLRILRNAFKAFDHDGAGSIEHADVSSILEILGQKLEPPAVKALIKEVDKGTTGKLDFSQ 69
            |..:||.:.:|.||:.||.||:|.||..::...:..||.:.:...:|.:|.||||..|||:.|:.
Zfish    24 ELTEEQKQEIREAFELFDTDGSGYIEVKELKVAMRALGFEPKKEEIKKMIAEVDKEATGKISFTD 88

  Fly    70 FCKLAARFIEVEEDVGALQNELKEAFRVYDKEGKGYLTVATLRGILHELDDKLSNQDLDMIIEEI 134
            |..:..:.: .|:|   .:.|:.:|||::|.:..|.::...|:.:..||.:.|::::|..:|:|.
Zfish    89 FLSVMTQKM-AEKD---SKEEILKAFRLFDDDETGKISFRNLKRVAKELGENLTDEELQEMIDEA 149

  Fly   135 DADGSGTVDFDEFMQVM 151
            |.||.|.|:..||:::|
Zfish   150 DRDGDGEVNQQEFLRIM 166

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TpnC4NP_610173.2 PTZ00184 1..152 CDD:185504 49/147 (33%)
cetn2XP_001345066.1 PTZ00183 16..172 CDD:185503 49/147 (33%)

Return to query results.
Submit another query.