DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30440 and KALRN

DIOPT Version :9

Sequence 1:NP_610172.1 Gene:CG30440 / 35496 FlyBaseID:FBgn0050440 Length:1057 Species:Drosophila melanogaster
Sequence 2:XP_006713873.1 Gene:KALRN / 8997 HGNCID:4814 Length:2988 Species:Homo sapiens


Alignment Length:1038 Identity:254/1038 - (24%)
Similarity:409/1038 - (39%) Gaps:289/1038 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 IHEGKKAI-MYRSSEPQIAARRNKKTRFVGNRRQLRNLSQPENSHKTSRSLCPDTAKT------- 92
            |.||:..| ..||:.|.:......:...|.|.:...:.|   .||..|.....|.|:.       
Human   700 IKEGEDLIQQLRSAPPSLGEPSEARDSAVSNNKTPHSSS---ISHIESVLQQLDDAQVQMEELFH 761

  Fly    93 EPKV-----YSLR----FVLNKSEDKDYMSR--LKAQNDF-SQSSCLCNNLSHANTEAGAYQN-- 143
            |.|:     ..||    :.:..:.:.|..:.  |:..||| ::...|.......:||.....|  
Human   762 ERKIKLDIFLQLRIFEQYTIEVTAELDAWNEDLLRQMNDFNTEDLTLAEQRLQRHTERKLAMNNM 826

  Fly   144 --DGILKGQRDHSDFLT--AAGGIQSRADR---IA--------------------------RIET 175
              :.|.:|| |...::|  .|.||:...::   :|                          |:|.
Human   827 TFEVIQQGQ-DLHQYITEVQASGIELICEKDIDLAAQVQELLEFLHEKQHELELNAEQTHKRLEQ 890

  Fly   176 CGIRTTHLQPET-QILKPVTEPNETRFDQHSPDWLFKNSRIGDVS--NSSKLSACNSELPPEEYK 237
            | ::..|||.|. |:|                .|:.....:.:.|  |:|.||  .:|....|::
Human   891 C-LQLRHLQAEVKQVL----------------GWIRNGESMLNASLVNASSLS--EAEQLQREHE 936

  Fly   238 G-----RTLYHDTKFDCAYIKNRRPLITTESKMSI-TEAEHPQTKYTDIKYD---YKTCSISQGL 293
            .     .:|:|.|...    |..:..:..:.|..: .:|.|         ||   .:.|:....|
Human   937 QFQLAIESLFHATSLQ----KTHQSALQVQQKAEVLLQAGH---------YDADAIRECAEKVAL 988

  Fly   294 HQNKAFLN----------KVPPSKQSKPFHSVDYDYYENIQKLHLSKESERQIRDN-GDPNDLQN 347
            |..:..|.          .|...|.|:...||    .|::::.:...|.....||. |...::.:
Human   989 HWQQLMLKMEDRLKLVNASVAFYKTSEQVCSV----LESLEQEYRRDEDWCGGRDKLGPAAEIDH 1049

  Fly   348 FL---------KKNLIKATT----------------NELLKAAAQSTKKCNIDLERKLNDLNIKE 387
            .:         |:..:||.|                |..:.:.|..|:.....::..|::| ::.
Human  1050 VIPLISKHLEQKEAFLKACTLARRNAEVFLKYIHRNNVSMPSVASHTRGPEQQVKAILSEL-LQR 1113

  Fly   388 EDHTSNDSGNSYKNDPYLVSMSKINSCK----FIRSYNRDCETIFPTGD-----HSDLNEFRKSF 443
            |:...:.         :.:...:::.|:    |.||..:..:.|..||:     |:...|..:  
Human  1114 ENRVLHF---------WTLKKRRLDQCQQYVVFERSAKQALDWIQETGEFYLSTHTSTGETTE-- 1167

  Fly   444 MPQSVDLLSSASVSLSSCDGSCLNKDSICGSEEDCCECNEYQCIATPPNELSKDCL----NAVEE 504
              ::.:||.                           |..|::..|....|..|..:    :.||:
Human  1168 --ETQELLK---------------------------EYGEFRVPAKQTKEKVKLLIQLADSFVEK 1203

  Fly   505 GVFCNTE-----------YDDFHENLTSSCCCSGSFCDDDGCSYLDEGLSVDIKSKNVQSLHESG 558
            |....||           |.||...:       |.:                             
Human  1204 GHIHATEIRKWVTTVDKHYRDFSLRM-------GKY----------------------------- 1232

  Fly   559 TDEKLSRKTILLARTEDTNDVTQGISDGTTYFTGSLNITHLPKS---NEIFKKPQDPEMQRHRR- 619
               :.|.:..|...|||..|               |.:..:|.|   .|:..:..:.|:...:| 
Human  1233 ---RYSLEKALGVNTEDNKD---------------LELDIIPASLSDREVKLRDANHEVNEEKRK 1279

  Fly   620 -----GHILKELFETEKIYVNEIASILKGY-YDRLKSDESAPASLQGKANVLFGNLNEIYSFHND 678
                 ..|:.||.:|||.||.::...|:.| ::.....|..|..:..|.:::|||:.|||.|||:
Human  1280 SARKKEFIMAELLQTEKAYVRDLHECLETYLWEMTSGVEEIPPGILNKEHIIFGNIQEIYDFHNN 1344

  Fly   679 VFLKDLENCISVTERVALCFVKRRDKFYQLYSFYCQNIQRSEKLRETLVDTHMFFKECQIGLGHK 743
            :|||:||....:.|.|..|||...||| |:|..||:|...|.:|  .|.....||.|.|...|..
Human  1345 IFLKELEKYEQLPEDVGHCFVTWADKF-QMYVTYCKNKPDSNQL--ILEHAGTFFDEIQQRHGLA 1406

  Fly   744 LPLGAYLLKPVQRITKYQLLLKDLLLFTDNDSCRNELKNALDCMLIVLKCVNDSMHQISITGFSG 808
            ..:.:||:||||||||||||||:||  |..:..:.|||:.|:.||.|.|..||:||...:.||..
Human  1407 NSISSYLIKPVQRITKYQLLLKELL--TCCEEGKGELKDGLEVMLSVPKKANDAMHVSMLEGFDE 1469

  Fly   809 DLAKQGELLMQDSFQVWIESKKDIRLRMKPKRRHIFLYQKSLLLCKQ-TSKSGYNKSSYQFKSDV 872
            :|..||||::||:|||| :.|..||   |.:.||:||::.||:..|: ...||:.|  |.:|:.:
Human  1470 NLDVQGELILQDAFQVW-DPKSLIR---KGRERHLFLFEISLVFSKEIKDSSGHTK--YVYKNKL 1528

  Fly   873 KMSQIGLTESVSGDAKRFEVWLKGR----QEVYTLQASTIGVKEMWVAEIKRVLFNQLEKLKG 931
            ..|::|:||.|.||..:|.:| .||    .....|:||.|..|:.|:..|:.|:..::..|||
Human  1529 LTSELGVTEHVEGDPCKFALW-SGRTPSSDNKTVLKASNIETKQEWIKNIREVIQERIIHLKG 1590

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30440NP_610172.1 RhoGEF 622..796 CDD:214619 75/174 (43%)
PH-like 802..925 CDD:302622 48/127 (38%)
PH 829..922 CDD:278594 34/97 (35%)
KALRNXP_006713873.1 SEC14 41..179 CDD:214706
SPEC 192..412 CDD:238103
SPEC 313..538 CDD:238103
SPEC 539..768 CDD:238103 17/70 (24%)
SPEC 893..1131 CDD:238103 47/282 (17%)
SPEC <1101..1240 CDD:295325 29/218 (13%)
RhoGEF 1286..1456 CDD:238091 75/174 (43%)
PH1_Kalirin_Trio_like 1463..1585 CDD:270060 48/128 (38%)
PH 1496..1581 CDD:278594 30/87 (34%)
SH3_Kalirin_1 1651..1710 CDD:212786
SH3-RhoG_link 1708..1934 CDD:293215
RhoGEF 1935..2105 CDD:279015
PH2_Kalirin_Trio_p63RhoGEF 2109..2243 CDD:270061
PH 2142..2228 CDD:278594
SH3_Kalirin_2 2327..2385 CDD:212787
I-set 2473..2567 CDD:254352
Ig 2490..2564 CDD:143165
FN3 2571..2662 CDD:238020
S_TKc 2686..2940 CDD:214567
STKc_Kalirin_C 2692..2939 CDD:271017
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S5845
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.860

Return to query results.
Submit another query.