DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30440 and Arhgef25

DIOPT Version :9

Sequence 1:NP_610172.1 Gene:CG30440 / 35496 FlyBaseID:FBgn0050440 Length:1057 Species:Drosophila melanogaster
Sequence 2:NP_082303.2 Gene:Arhgef25 / 52666 MGIID:1277173 Length:618 Species:Mus musculus


Alignment Length:504 Identity:150/504 - (29%)
Similarity:241/504 - (47%) Gaps:79/504 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   474 SEEDCCE-----CNEYQCIATPPNELSKDCLNAVEEGVFCNTEYDDFHENLTSSCCCSG------ 527
            :|.||.|     ..|.:.:|..|...|...  ||.||..             |:...||      
Mouse    47 TESDCIEEDQTGQREPEVLAWAPQPESYSI--AVSEGSM-------------SASAVSGLAALSG 96

  Fly   528 --SFCDDDGCSYLDEGLSVDIK-----SK---NVQSLHESG---------------TDEKLSRKT 567
              |....|.||.:..|....::     ||   :|::..|||               |.::|...|
Mouse    97 PSSGLSSDPCSPIPPGPVTGLRRWLDHSKHCLSVETEAESGQTGQCENWTLEPTLTTGQELPELT 161

  Fly   568 ILLARTEDTNDVTQGISDGTTYFTGSLNITHLPKSNEIFKKPQDPEMQRHRRGHILKELFETEKI 632
            :|....|...|..|...:.|        ::..||:.|..||     |...|...:|.||.|||:.
Mouse   162 LLTTLLEGPGDKAQPAEEET--------LSQAPKNEEEQKK-----MALERSMFVLGELVETERT 213

  Fly   633 YVNEIASILKGYYDRLKSDESAPASLQGKANVLFGNLNEIYSFHNDVFLKDLENCISVTERVALC 697
            ||:::..|::||...: :.:..|.||:|:..::|||:.:||.:|.|.||::|:.|:...:.:|..
Mouse   214 YVDDLGQIVEGYMATM-ATQGVPESLRGRDRIVFGNIQQIYEWHRDYFLQELQQCLKDPDWLAQL 277

  Fly   698 FVKRRDKFYQLYSFYCQNIQRSEKLRETLVDTHMFFKECQIGLGHKLPLGAYLLKPVQRITKYQL 762
            |:|...:.: :|..||||..:||.:.....|:  :|:|.:..|||:|.|...|:||||||.||||
Mouse   278 FIKHERRLH-MYVVYCQNKPKSEHVLSEFGDS--YFEELRQQLGHRLQLNDLLIKPVQRIMKYQL 339

  Fly   763 LLKDLLLF---TDNDSCRNELKNALDCMLIVLKCVNDSMHQISITGFSGDLAKQGELLMQDSFQV 824
            ||||.|.:   ...|:  .||:.|::.|..|.|..||.|....:.||.|.|..||:||.||:|.|
Mouse   340 LLKDFLKYYRRAGKDT--EELEQAVEVMCFVPKRCNDMMSLGRLRGFEGKLTAQGKLLGQDTFLV 402

  Fly   825 WIESKKDIRLRMKPKRRHIFLYQKSLLLCKQTSKSGYN--KSSYQFKSDVKMSQIGLTESVSGDA 887
             .|.:....|..:.:.|.:||:::.::..:.....|..  :..|.:|:.:|:|.:||..::.|:.
Mouse   403 -TEPEAGGLLSSRGRERRVFLFEQIIIFSEALGGGGRGGAQPGYVYKNSIKVSCLGLEGNLQGNP 466

  Fly   888 KRFEVWLKGRQ---EVYTLQASTIGVKEMWVAEIKRVLFNQLEKLKGDQ 933
            .||.:..:|.:   :.|.||||...|.:.|:.::.::|.:|.:.|...|
Mouse   467 CRFALTSRGPEGGIQRYVLQASDPAVSQAWIKQVAQILESQRDFLNALQ 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30440NP_610172.1 RhoGEF 622..796 CDD:214619 67/176 (38%)
PH-like 802..925 CDD:302622 36/127 (28%)
PH 829..922 CDD:278594 22/97 (23%)
Arhgef25NP_082303.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 26..63 5/15 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 169..193 6/31 (19%)
RhoGEF 203..374 CDD:279015 67/176 (38%)
Important for binding to Rho GTPases. /evidence=ECO:0000250 317..338 13/20 (65%)
PH2_Kalirin_Trio_p63RhoGEF 378..520 CDD:270061 39/139 (28%)
Sufficient to bind activated GNAQ. /evidence=ECO:0000250 506..532 3/10 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 521..556
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 584..604
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0689
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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