DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30440 and itsn1

DIOPT Version :10

Sequence 1:NP_610172.1 Gene:CG30440 / 35496 FlyBaseID:FBgn0050440 Length:1057 Species:Drosophila melanogaster
Sequence 2:XP_005171028.1 Gene:itsn1 / 368504 ZFINID:ZDB-GENE-030616-226 Length:1751 Species:Danio rerio


Alignment Length:498 Identity:118/498 - (23%)
Similarity:201/498 - (40%) Gaps:102/498 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   589 YFTGSLN--ITHLPKSNEIFKKPQDPEMQ---------------RHRRGHILKELFETEKIYVNE 636
            ::.|.||  :...|.:........||..|               |.|:|:| .||..||:.|||:
Zfish  1222 WWKGELNGSVGLFPSNYVKLTTDTDPSQQWCADLHLLDMLTPVERKRQGYI-HELIVTEENYVND 1285

  Fly   637 IASILKGYY------DRLKSDESAPASLQGKANVLFGNLNEIYSFHNDVFLKDLENCISVT-ERV 694
            :..:.:.:.      |.|...|.|         ::|.|..|: :..|...||.|.....:: ||:
Zfish  1286 LQLVTETFQKPLLESDLLTEKEVA---------MIFVNWKEL-TMCNIKLLKALRVRKKMSGERM 1340

  Fly   695 ALCFV----KRRDKFYQLYSFYCQNIQRSEKLRETLVDTHMFFKE----------CQIGLGHKLP 745
            .:..:    ..:....|.|..:|........|.:...|....||:          |:     .:|
Zfish  1341 PVKMIGDILTAQLPHMQPYIRFCSCQLNGATLIQQKTDEVPEFKDFVKRLAMDPRCK-----GMP 1400

  Fly   746 LGAYLLKPVQRITKYQLLLKDLLLFT-----DNDSCRNELKNALDCMLIVLKCVNDSMHQISITG 805
            |.::||||:||:|:|.|::|::|..|     |:...|..|:.|.:....|.:.|.:..:...:..
Zfish  1401 LSSFLLKPMQRVTRYPLIIKNILENTPESHPDHSHLRLALEKAEELCSQVNEGVREKENSDRLEW 1465

  Fly   806 FSGDLAKQG--ELLMQDSF------QVWIESKKDIRLRMKPKRRHIFLYQKSLLL---CKQTSKS 859
            ....:..:|  |.|:.:|.      :.::.|.|..:.:.. |..:.||:...|||   .|....|
Zfish  1466 IQAHVQCEGLSEQLVFNSVTNCLGPRKFLHSGKLYKAKSN-KELYGFLFNDFLLLTQIIKPLGSS 1529

  Fly   860 GYN-----KSSYQ---FKSDVKMSQ--IGLTESVSGDAKRFEVWLKGRQEVYTLQASTIGVKEMW 914
            |.:     ||..|   :|:.:.:::  :.|....|||...|.:  .....|||::|.:|..:..|
Zfish  1530 GTDKVFSAKSHLQYRMYKTPIFLNEVLVKLPTDPSGDEPIFHI--SHIDRVYTIRAESINERTAW 1592

  Fly   915 VAEIKRV--LFNQLEKLKGDQIARYNIRHQSLWQKSSCEAPNITHCSLRRTECFELPLNDSNRNT 977
            |.:||..  ||.:.||.|.::  .|.:|.|        .|..|....:...|..||....||..:
Zfish  1593 VQKIKAASELFIETEKRKREK--AYLVRSQ--------RATGIGRLMVNIVEGIELKPCRSNGKS 1647

  Fly   978 NIRSEKTCLSDQNIVNGPSVQDQHEKNSWSSDC----SDIDED 1016
            |...|.|..|..::..  ::||.... .|:|:|    .|:::|
Zfish  1648 NPYCEVTMGSQCHVTK--TLQDTLNP-KWNSNCQFFIKDLEQD 1687

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30440NP_610172.1 RhoGEF 622..796 CDD:214619 49/199 (25%)
PH-like 802..925 CDD:473070 35/145 (24%)
itsn1XP_005171028.1 EH 15..112 CDD:197477
EH 215..293 CDD:197477
SMC_prok_B 438..>646 CDD:274008
SH3_Intersectin1_1 731..790 CDD:212920
INTAP 790..932 CDD:435467
SH3_Intersectin1_2 932..983 CDD:212922
SH3 1034..1085 CDD:473055
SH3_Intersectin1_4 1102..1166 CDD:212926
SH3_Intersectin1_5 1188..1241 CDD:212928 4/18 (22%)
RhoGEF 1268..1451 CDD:238091 49/198 (25%)
PH_13 1470..1612 CDD:465218 38/144 (26%)
C2_Intersectin 1612..1746 CDD:176021 21/89 (24%)
Blue background indicates that the domain is not in the aligned region.

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