DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30440 and plekhg4

DIOPT Version :9

Sequence 1:NP_610172.1 Gene:CG30440 / 35496 FlyBaseID:FBgn0050440 Length:1057 Species:Drosophila melanogaster
Sequence 2:XP_009301619.1 Gene:plekhg4 / 326099 ZFINID:ZDB-GENE-030131-4824 Length:2630 Species:Danio rerio


Alignment Length:1168 Identity:252/1168 - (21%)
Similarity:438/1168 - (37%) Gaps:352/1168 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 PTKMEEDSDTRNSTYVP---KMELLMTHYIHEGKKAIMYRSSEPQIAARRNKKTRFVGNRRQLRN 71
            ||:.|......:|::|.   ::|.|.:|             .|..::..:|..::       |.:
Zfish  1567 PTEFEGTFPYAHSSWVSFRMRLEQLTSH-------------CEDAVSLLQNTISK-------LES 1611

  Fly    72 LSQPENSHKTSRSLCPDTAKTEPKVYSLRFVLNKSEDKDYMSRLKAQNDFSQSSCLCNNLSHANT 136
            ...|..:.:....||.........:...|.|..:.|....:|||:.:   ..|..|..:...|..
Zfish  1612 TVLPPTAEEAQLLLCKYRELMRTVLEDSRLVRLQLEGGAALSRLRKE---ETSVSLTEDYRDAIE 1673

  Fly   137 EAGAYQND--------------------------GILKGQRDHSDFLTAAGGIQSRADRIARIET 175
            .||...|.                          .:.:|.::.|.::...|  :||...::.:|.
Zfish  1674 SAGRLYNQVDELVHRLVMLSNKCTQELEFIMEFKSLEEGFKEVSQWIEEVG--ESRLQTLSELED 1736

  Fly   176 CGIRTTHLQPETQILKPVTEPNETRFDQH--SPDWLFKN-SRIGDVSNSSKLSACNSELPPEEYK 237
            ...:..|.|       .:.....|...:|  |.:.|.|. .:..|||        ::||...|.|
Zfish  1737 SLEQLHHKQ-------SIFREFYTAAYEHCKSGEALLKRLEKWEDVS--------SAELQVYEVK 1786

  Fly   238 GRTLY----------HDTK------------FDCAY---IKNRRPL---------ITTESKMSIT 268
            .|:.:          .|||            ||.||   ::..|.|         ::.:.:..||
Zfish  1787 VRSFWVHLRDFSQRVEDTKDKIDKTVQLYEFFDKAYEWALEGMRHLACVSMEDCGMSEKCQSVIT 1851

  Fly   269 -----EAEHPQ------TKYTDIKYDYKTCSISQGLHQNKAFLNKVPPSKQSKPFHSVDYDYYEN 322
                 .::||.      .:..|:..:.|:   .|||.|.|...:|...:||          .:| 
Zfish  1852 CLETYRSQHPPIPDAHFQEMKDLAGELKS---EQGLKQWKFAWSKCQETKQ----------MFE- 1902

  Fly   323 IQKLHLSKESERQIRDNGDPNDLQNFLKKNLIKATTNELLKAAAQSTKKCNIDLERKLNDLNIKE 387
             :||.::..|.|.                               ..:|....|..|:.:|::.|.
Zfish  1903 -KKLEMALRSRRD-------------------------------SDSKSVRSDSSRRNSDVSTKH 1935

  Fly   388 EDHTSNDSGNSYKNDPYLVSMSKINSCK--FIRSYNRDCETIFPTGDHSDLNEFRKSFMPQSVDL 450
            ::.:|:.|                .||:  |..::.||     ....|                 
Zfish  1936 QERSSSIS----------------FSCRKAFGGAWGRD-----RLSSH----------------- 1962

  Fly   451 LSSASVSLSSCDGSCLN-KDSICGSEEDCCECNEYQCIATPPNELSKDCLNAVEEGVFCNTEYDD 514
             ||.|.:.||..|..|: :|:                :.||...     ..::|..:..:|....
Zfish  1963 -SSTSSTPSSPSGIRLDARDT----------------VRTPTGS-----PYSIEHRIPHSTPVRS 2005

  Fly   515 FHENLTSSCCCSGSFCDDDGCSYLDEGLSVDIKSKNVQSLHESGTDEKLSRKTILLARTEDT--- 576
              ..||.|..     .|:...|...|||:         |...|||..:.:|:.:...::.||   
Zfish  2006 --HRLTRSIS-----TDESPQSPHAEGLA---------STSPSGTSVQTNRRVLRKTQSFDTAGS 2054

  Fly   577 NDVTQ------GISD-----GTTYFTGSLNITHLPKSNEIFKKPQDPEM---------QRHRRG- 620
            ..|:|      .:|:     .|..|...|.::    |.|:..:|..|.:         ..||.| 
Zfish  2055 EPVSQYGTCQRTLSEPARRGNTGVFIKGLEVS----STEVIDRPYSPRLPPIHGWSSIDAHRSGS 2115

  Fly   621 -------------HILKELFETEKIYVNEIASILKGYYDRLKSDESA--PASLQGKANVLFGNLN 670
                         ||:.|:..||:.||..:..|:..|:..:   |.|  |..|:||.:|:||||.
Zfish  2116 PAPETRSKGSKLRHIVDEMVTTEREYVRSLRYIIDNYFPEM---ERAVLPQDLRGKRSVIFGNLE 2177

  Fly   671 EIYSFHNDVFLKDLENCISVTERVALCFVKRRDKFYQLYSFYCQNIQRSEKLRETLVDTH--MFF 733
            ::..||:..|||:||:|.:...||:.||::.:|:| .||:.|.:|..:|    :||:.:|  .||
Zfish  2178 KLVDFHSQYFLKELESCCNHPLRVSHCFLRHQDQF-SLYALYSKNKPKS----DTLLASHGNNFF 2237

  Fly   734 KECQIGLGHKLPLGAYLLKPVQRITKYQLLLKDLL--LFTDNDSCRNELKNALDCMLIVLKCVND 796
            |..|:.||.|:.|.:|||||:||::||.||||||:  :....:.....|:.|.:.:...|:..||
Zfish  2238 KHKQMELGDKMDLASYLLKPIQRMSKYALLLKDLIKEVSEVQEQELTYLRAAAEMVKFQLRHGND 2302

  Fly   797 SMHQISITGFSGDLAKQGELLMQDSFQVWIESKKDIRLRMKPKRRHIFLYQKSLLLCKQTSKSGY 861
            .:...:|.....:|.:||:|:.||.|.:....||        .:||:||::..:|..|.....| 
Zfish  2303 LLAMDAIRDCDVNLKEQGQLVRQDEFTISYGRKK--------CQRHVFLFEDLVLFSKPKRIEG- 2358

  Fly   862 NKSSYQFKSDVKMSQIGLTESVSGDAKRFEVWLKGR---QEVYTLQASTIGVKEMWVAEIKRVLF 923
            ....|.:|...|.:.:|:||:...::.|||:|.:.|   .:.|.||:||..:|..|..:|.|:|:
Zfish  2359 GLDVYIYKHSFKTADVGMTETSGENSLRFEIWFRRRTSKNQTYILQSSTADIKHAWTCDIARILW 2423

  Fly   924 NQLEKLK---------------------------GDQIARYNIRHQSLWQKSSCEAPNITHCSLR 961
            .|..:.|                           .|:...|.::.:....::|.......|.:..
Zfish  2424 QQATRNKEIRMQEMVSMGVGNKPFLDIKPSDAAINDRAIDYIMKGRGARTRASIAVSLFDHSNPF 2488

  Fly   962 RTECFELPLNDS-------------NRNTNIRSEKTCLSDQNIVNGPSVQD---QHEKNSWSS 1008
            :......|::.:             ..|.::.|.::.|:.:..:.||.:::   :||.:|..|
Zfish  2489 KRAAVNTPVSGTPVSGGPSSSTLLGPLNLHMYSSQSLLAGERPLIGPCIEEDELEHETSSQPS 2551

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30440NP_610172.1 RhoGEF 622..796 CDD:214619 67/179 (37%)
PH-like 802..925 CDD:302622 38/125 (30%)
PH 829..922 CDD:278594 29/95 (31%)
plekhg4XP_009301619.1 COG5099 467..>912 CDD:227430
SEC14 1433..1573 CDD:238099 3/5 (60%)
BAR <1707..>1807 CDD:299863 24/116 (21%)
RhoGEF 2130..2302 CDD:279015 67/179 (37%)
PH_puratrophin-1 2294..2430 CDD:270062 42/144 (29%)
PH 2319..2414 CDD:278594 32/103 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0689
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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