DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30440 and Plekhg4

DIOPT Version :9

Sequence 1:NP_610172.1 Gene:CG30440 / 35496 FlyBaseID:FBgn0050440 Length:1057 Species:Drosophila melanogaster
Sequence 2:XP_038954139.1 Gene:Plekhg4 / 307796 RGDID:1310790 Length:1231 Species:Rattus norvegicus


Alignment Length:1120 Identity:249/1120 - (22%)
Similarity:427/1120 - (38%) Gaps:290/1120 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 YRSSEPQIAARRNKKTRFVGNRRQL--------------------------RNLSQPENSHKTSR 83
            :.|.:||....::...|..||:|.:                          .||:|.||.|:...
  Rat    66 FLSKKPQSLPDQSAADRSGGNQRSILGAPQAQSEEPAFSEMENCLCPGSSHLNLTQGENDHRGGG 130

  Fly    84 SL-CPDTAKTEPKVYS-LRFVLNKSEDKDYMSRLKAQNDFSQ-SSC-LCNNLSHANTEAGAYQND 144
            .: .|:..:..|..:| |..:.:|..:.|     .:.:.|.: :.| |..:|:.....:|.....
  Rat   131 LIGDPEPGRALPAGFSPLLEMSSKLPEAD-----PSGSSFPRPADCLLARDLTWELLASGMAALP 190

  Fly   145 GILKG----------QRDHSDFLTAAGGIQSRADRIARIETCGIRTTHL---------------- 183
            |.|.|          .|.||...|....|:.||..:    .|......|                
  Rat   191 GSLGGLMRWRKWPGKARIHSLLSTGTRDIEGRAVLL----LCAHSPAWLHPKCNSHELLSLLFYL 251

  Fly   184 ----QPETQIL-------KPVTEPNE------TRFDQHSPDWLFKNSRIGDV------------- 218
                :||.|.|       ..:..|:.      ::..:.||..:.:...:|.:             
  Rat   252 RGIPRPEVQALGLTVLVDARICPPSSALTWGLSQLQEASPGSVQQLLLVGKMPEDMPVGLQAKQL 316

  Fly   219 -SNSSKLSAC-NSELPPE-------------EYKGR--TLYHDTKFDCAYIKN--------RRPL 258
             |:.|.|:.. |.|||..             :::.|  ||....:..||.::.        |:||
  Rat   317 ASHQSLLTHIPNMELPTSLGGCLSYCHQAWLDFRMRLETLQQSCQVACALLQGVIDSMKAMRQPL 381

  Fly   259 ITTESKMSITEA--------EHPQTKYTDIKYDYKTCSISQGLHQNKAFLNKVPPSKQSKPFHSV 315
            .:.|....:.:|        |.||..:..          ||| ....|:|      ||..|..::
  Rat   382 ESGEVGELLQQAQSLMQQVLESPQLSWLQ----------SQG-SLELAWL------KQGMPQVAL 429

  Fly   316 DYDYYENIQK-----------LH-LSKESERQIRDNGDPNDLQNFLKKNLIKATTNELLKA-AAQ 367
            ..||...:.|           || |:.:|.::||                    ..|||:| .||
  Rat   430 SPDYRSAVDKADELYGQVDELLHRLTLKSNQRIR--------------------ALELLQALEAQ 474

  Fly   368 STKKCNIDL-ERKLNDLNIKEEDHTSND-----SGNSYKNDPYLVSMSKINSCKFIRS--YNRDC 424
            ....|.|:: .:::....::|....|.|     .|...:.|  ||:..::...:.:..  ...:.
  Rat   475 EGVLCQIEVWLQEVGWPGLEEPGEPSLDMLLQAQGPFQELD--LVAQEQVKQGEKLLQPLVGWEA 537

  Fly   425 ETIFPTGD-----HSDLNEFRKSFMPQSVDLLSSASVSLSSCDGSCLNKDSICGSEEDCCECNEY 484
            ..:.|||.     .|.|.||.:: :.|....|:.|.....      ..|.:...:||.       
  Rat   538 AELGPTGKRFLALRSQLMEFSRA-LAQRRQRLADAEKLFQ------FFKQASTWTEEG------- 588

  Fly   485 QCIATPPNELSKDCLNAVEEGVFCN-TEYDDF----------------HENLTSSCCCSGSFCDD 532
            |.:.|   ||.::....|.:.:..: :::.|.                .|.:...|..:.:.|.|
  Rat   589 QRVLT---ELEQETPEVVLQRLQLHWSKHPDLPPAHFRKMWALATGLGSEGIRQECRWAWAQCQD 650

  Fly   533 DGCSYLDEGLSVDIKSKNVQSLHESGTDEKLSRKTILLARTEDTNDVTQG--ISDGTT--YFTGS 593
            ...: ||:.....:|.:::.|..........:..||...|...:.|...|  :.|.:.  :...:
  Rat   651 TWLA-LDQKREAALKPQSMNSTATLYVRRAPAIPTIPPLRKSYSFDQNLGKHLGDASNRGHCAAT 714

  Fly   594 LNITHLPKSNEIFKKPQDPEM---------QRHRRGHILKELFETEKIYVNEIASILKGYYDRL- 648
            :...|.|::....:....|.:         ..:|...:|.|:..||:.||..:...::.|:..| 
  Rat   715 VTDCHRPEARGGIRPRSSPSVPLSGSSDFRSPNRLQLVLAEMVATEREYVRALDYTIQNYFPELD 779

  Fly   649 KSDESAPASLQGKANVLFGNLNEIYSFHNDVFLKDLENCISVTERVALCFVKRRDKFYQLYSFYC 713
            :||  .|..|:|:...|||||.::..||...||::||.|.....|||..|::.|.:| .:|:.|.
  Rat   780 RSD--VPQGLRGQRAHLFGNLEKLRDFHFHFFLRELEACTRHPPRVAHAFLRHRVQF-GMYALYS 841

  Fly   714 QNIQRSEKLRETLVDTHMFFKECQIGLGHKLPLGAYLLKPVQRITKYQLLLKDLLLFTDNDSC-- 776
            :|..||:.|....  .|.||||.|..||..|.|.:|||||:||::||.|||::|.     .:|  
  Rat   842 KNKPRSDALMSNY--GHTFFKEKQQALGDHLDLASYLLKPIQRMSKYALLLQELA-----RACGG 899

  Fly   777 ----RNELKNALDCMLIVLKCVNDSMHQISITGFSGDLAKQGELLMQDSFQVWIESKKDIRLRMK 837
                ...|:.|...:...|:..||.:...:|.|...:|.:||:|:.||.|.|.....|..     
  Rat   900 PAQELGALQAAQSLVHFQLRHGNDLLAMDAIQGCDVNLKEQGQLVRQDEFTVRAGHHKSC----- 959

  Fly   838 PKRRHIFLYQKSLLLCK-QTSKSGYNKSSYQFKSDVKMSQIGLTESVSGDAKRFEVWLKGR--QE 899
               |.:||:::.||..| :...:|.:  .:.:|...||:.:||||.......|||:|.:.|  ::
  Rat   960 ---RRVFLFEELLLFSKPRRGPAGVD--IFTYKRSFKMADLGLTECCGESKLRFEIWFRRRKARD 1019

  Fly   900 VYTLQASTIGVKEMWVAEIKRVLFNQL---EKLKGDQIARYNIRHQSLWQKSSCEAPNITHCSLR 961
            ::.||||.:..|:.|.|:|.|:|:.|.   ::::..::|...:.:::.|.    .||:       
  Rat  1020 LFVLQASDVATKQAWTADISRLLWRQAVHNKEVRMAEMASMGVGNKAFWD----IAPS------- 1073

  Fly   962 RTECFELPLNDSNRN 976
                 |..:||.|.|
  Rat  1074 -----EEAINDRNIN 1083

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30440NP_610172.1 RhoGEF 622..796 CDD:214619 64/180 (36%)
PH-like 802..925 CDD:302622 40/125 (32%)
PH 829..922 CDD:278594 29/95 (31%)
Plekhg4XP_038954139.1 SPEC 463..>614 CDD:413338 34/189 (18%)
RhoGEF 749..915 CDD:238091 63/175 (36%)
PH_puratrophin-1 915..1050 CDD:270062 44/144 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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