DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30440 and Sestd1

DIOPT Version :10

Sequence 1:NP_610172.1 Gene:CG30440 / 35496 FlyBaseID:FBgn0050440 Length:1057 Species:Drosophila melanogaster
Sequence 2:NP_001127986.2 Gene:Sestd1 / 295678 RGDID:1562244 Length:696 Species:Rattus norvegicus


Alignment Length:450 Identity:92/450 - (20%)
Similarity:147/450 - (32%) Gaps:156/450 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   303 VPPSKQSKPF-HSVDYDYYENIQKL----HLSKES-----ERQIRDNGDPN----------DLQN 347
            :.|.:.::.| .|:.||:.:.:.|.    ..:|||     |..:.:||...          || |
  Rat   136 IEPCQLTEDFGGSLTYDHMDWLNKRLVFEKFTKESTSLLDELALINNGSDKGNEQEKERSVDL-N 199

  Fly   348 FLKK---NLIKATTNELLKAAAQSTKKCNIDLERKLNDLNIKEEDHTSNDSGNSYK--NDPYLVS 407
            ||..   ..:..|.:|||....|          |:.|          .:|.|.|:.  :|..|..
  Rat   200 FLPSVDPETVLQTGHELLSELQQ----------RRFN----------GSDGGVSWSPMDDELLAQ 244

  Fly   408 ---MSKINSCKFIRSYNRDCETIFPTGDHSDLNEFRKSFM--------PQSVDLLS--------- 452
               |..::|.:  ..|.|..|........:.|.|.::..|        |.|..|.:         
  Rat   245 PQVMKLLDSLR--EQYTRYQEVCRQRSKRTQLEEIQQKVMQVVNWLEGPGSEQLRAQWGIGDSIR 307

  Fly   453 --------------------SASVSLSSCDGSCLNKDSICGSEEDCCECNEYQCIATPPNELSKD 497
                                :..|.|:....:.||    .|.|||..|....|      .:||..
  Rat   308 ASQALQQKHEEIESQHSEWFAVYVELNQQIAALLN----AGDEEDLVELKSLQ------QQLSDV 362

  Fly   498 CLNAVEEGVFCNTEYDDFHENLTSSCC---------------CSGSFCDD----DGCS------Y 537
            |.....:        .:|.:||..:..               ..|..|.|    ||.|      .
  Rat   363 CYRQASQ--------LEFRQNLLQAALEFHGVAQDLSQQLDGLLGMLCVDVAPADGASIQQTLKL 419

  Fly   538 LDEGL-SVDIKSKNVQSLHESGTD--EKLSRKTILLARTEDTNDVTQGISDGTTYFTGSLNITHL 599
            |:|.| |||:   .:|.|.|.|..  :::|.:    |......|||....:...:..|.:....|
  Rat   420 LEEKLKSVDV---GLQGLREKGQGLLDQISNQ----ASWAYGKDVTIENKENVDHIQGVMEDMQL 477

  Fly   600 PKSNEIFKKPQDPEMQRHRRGHILK--ELFETEK------IYVNEIASILKGYYDRLKSD 651
                   :|.:..:|...||..:|:  :||:.|:      .:::|:...|...:.||..|
  Rat   478 -------RKQRCEDMVDVRRLKMLQMVQLFKCEEDASQAVEWLSELLDALLKTHIRLGDD 530

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30440NP_610172.1 RhoGEF 622..796 CDD:214619 8/37 (22%)
PH-like 802..925 CDD:473070
Sestd1NP_001127986.2 CRAL_TRIO_2 33..153 CDD:463965 4/16 (25%)
SPEC 273..478 CDD:413338 45/236 (19%)
SPEC 413..605 CDD:413338 29/131 (22%)
Blue background indicates that the domain is not in the aligned region.

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