DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30440 and unc-73

DIOPT Version :9

Sequence 1:NP_610172.1 Gene:CG30440 / 35496 FlyBaseID:FBgn0050440 Length:1057 Species:Drosophila melanogaster
Sequence 2:NP_001021496.1 Gene:unc-73 / 171988 WormBaseID:WBGene00006805 Length:2488 Species:Caenorhabditis elegans


Alignment Length:568 Identity:148/568 - (26%)
Similarity:232/568 - (40%) Gaps:117/568 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   384 NIKEEDHTSNDSGNSYKNDPYLVSMSKINSCKFIRSYNRDCETIFPTGDHSDLNEFRKSFMPQSV 448
            |..:|...:.:|.:|..|.|.....:..:|......:..:..|..|.|..|       |..|.|.
 Worm  1666 NSSKERAAAANSSSSNNNSPATRQSTSTSSPVTANGHTTESSTSAPIGVLS-------SGEPTSS 1723

  Fly   449 DLLSSASVSL----SSCDGSCLNKDSICGSEEDCCECNEYQCIATPPNELSKDCLNAVEEGVFCN 509
            :.:.|:|...    ||...:.:.                   |....:|.::|||....|.:..|
 Worm  1724 NSIPSSSTPTHTVPSSVPATVIP-------------------IVVAEDEKAEDCLPPPMENITIN 1769

  Fly   510 TEYDDFHENLTSSCCCSGSFCDDDGCSYLDEGLSVDIKSKNVQSLHESGTDEKLSRKTILLARTE 574
            .                                |:|.|..|..|:..|   :.:..:..|.|:.|
 Worm  1770 N--------------------------------SIDEKDMNEDSVAAS---DAVEPEVALPAKVE 1799

  Fly   575 DTNDVTQGISDGTTYFTGSLNITHLPKSNEIFKKPQDPEMQRHRRGHILKELFETEKIYVNEIAS 639
            .|.:                                  |..|.:|.::|.||.|||:.||.::.|
 Worm  1800 KTPE----------------------------------ETARFKRSYVLMELVETEQDYVKDLTS 1830

  Fly   640 ILKGYYDRL-KSDESAPASLQGKANVLFGNLNEIYSFHNDVFLKDLENCISVTERVALCFVKRRD 703
            :::||...| |.|  .||.|.||..::|.|:..|..||...|||::|.|....|.....|||...
 Worm  1831 VVEGYIGNLNKMD--LPADLVGKDKIIFANIVNILEFHKTNFLKEIEKCSENYEAAGAAFVKYER 1893

  Fly   704 KFYQLYSFYCQNIQRSEKLRETLVDTHMFFKECQIGLGHKLPLGAYLLKPVQRITKYQLLLKDLL 768
            :.:.||..||||..:|:.|. ...|...||.:.:..||||:.|...|:||||||.||||||||:|
 Worm  1894 RLHTLYVTYCQNKPKSDYLL-AQDDFEAFFADTKAKLGHKVALCDLLIKPVQRIMKYQLLLKDIL 1957

  Fly   769 LFTDNDSCRNE-LKNALDCMLIVLKCVNDSMHQISITGFSGDLAKQGELLMQDSFQVWIESKKDI 832
            .||:....:.: ||.||..|.:|.|..:|.|....:..|...|:.||:|:.|.:.|:......::
 Worm  1958 KFTERAKDKTDTLKKALQVMHVVPKACDDMMQVGRLQNFDKSLSAQGKLIHQGTLQISESIAGNV 2022

  Fly   833 RLRMKPKRRHIFLYQKSLLLCKQ-TSKSGYNKSSYQFKSDVKMSQIGLTESVSGDAKRFEVWLKG 896
            :   |||.|.|||:::|.::... ..|..:...:|.|||...::::....:|..|..||.:  |.
 Worm  2023 Q---KPKDRRIFLFEQSAIIADHIPPKKEFGNPTYIFKSQFMVNKMVFEPNVPDDPLRFVI--KS 2082

  Fly   897 RQEV----YTLQASTIGVKEMWVAEIKRVLFNQLEKLKGDQI--ARYN 938
            ....    :...|.:...|:.|..::..:| :|.::|....:  .|||
 Worm  2083 SDPTQPTSFIANAQSQEEKDEWNRKMSELL-DQQKRLLAALVDPRRYN 2129

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30440NP_610172.1 RhoGEF 622..796 CDD:214619 74/175 (42%)
PH-like 802..925 CDD:302622 29/127 (23%)
PH 829..922 CDD:278594 21/97 (22%)
unc-73NP_001021496.1 SEC14 19..156 CDD:214706
SPEC 422..568 CDD:295325
SPEC 849..1063 CDD:295325
RhoGEF 1208..1383 CDD:238091
PH-like 1391..1509 CDD:302622
PH 1419..1511 CDD:278594
SH3 1575..1634 CDD:302595
RhoGEF 1813..1986 CDD:279015 74/175 (42%)
PH2_Kalirin_Trio_p63RhoGEF 1990..2128 CDD:270061 31/143 (22%)
I-set 2305..2391 CDD:254352
Ig 2335..2392 CDD:299845
FN3 2395..2473 CDD:214495
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 123 1.000 Domainoid score I3467
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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