DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment stw and FET3

DIOPT Version :9

Sequence 1:NP_001137606.1 Gene:stw / 35494 FlyBaseID:FBgn0286203 Length:784 Species:Drosophila melanogaster
Sequence 2:NP_013774.1 Gene:FET3 / 855080 SGDID:S000004662 Length:636 Species:Saccharomyces cerevisiae


Alignment Length:576 Identity:154/576 - (26%)
Similarity:243/576 - (42%) Gaps:124/576 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   207 AACQVCTPNATNTVWSHCQCVLADGVE-RGILTANRMIPGPSIQVCENDKVVIDVENHMEGMEVT 270
            |..:..|.|.| |.|.:..   .||:: |.::|.|...|.|.|.|.:.|:|.|.:.|.|.....:
Yeast    19 AQAETHTFNWT-TGWDYRN---VDGLKSRPVITCNGQFPWPDITVNKGDRVQIYLTNGMNNTNTS 79

  Fly   271 IHWHGIWQRGSQYYDGVPFVTQCPIQQGNTFRYQWT--GNAGTHFWHAHTGLQKLDGLYGSVVVR 333
            :|:||::|.|:...|||||:|||||..|:|..|.:|  .|.||:::|:||..|..||:.|..:::
Yeast    80 MHFHGLFQNGTASMDGVPFLTQCPIAPGSTMLYNFTVDYNVGTYWYHSHTDGQYEDGMKGLFIIK 144

  Fly   334 QPPSRDPNSHLYDFDLTTHIMLISDWLHEDAAERYPGRLAV--NTGQD--PESMLINGKGQFRDP 394
            .      :|..||:|....:.| |:|.|:...:.....::|  .||.:  |:::::|        
Yeast   145 D------DSFPYDYDEELSLSL-SEWYHDLVTDLTKSFMSVYNPTGAEPIPQNLIVN-------- 194

  Fly   395 NTGFMTNTPLEIFTITPGRRYRFRMIN--AFASVCPAQVTIEGHGMTVIATDGEPVHPVDVNTII 457
            ||..:|      :.:.|...|..|::|  .|.|   ....||.|.|||:..||........:.:.
Yeast   195 NTMNLT------WEVQPDTTYLLRIVNVGGFVS---QYFWIEDHEMTVVEIDGITTEKNVTDMLY 250

  Fly   458 SFSGERYDFVISADQPVGAYWIQLRGLGECGIRRAQQLAILRYARGPYQPASSPPTYDVGIPQGV 522
            ....:||..::.......                 :..||::        .......|| ||..:
Yeast   251 ITVAQRYTVLVHTKNDTD-----------------KNFAIMQ--------KFDDTMLDV-IPSDL 289

  Fly   523 ILNPLDAICDRKRADAVCVSNLKNAKKVDKGVLVERPDVKIFL-PFRFFVYEPKALFIPNTYNRF 586
            .||....:...|.|      .|.....||        .:..|| .|....||.:|::        
Yeast   290 QLNATSYMVYNKTA------ALPTQNYVD--------SIDNFLDDFYLQPYEKEAIY-------- 332

  Fly   587 LVVPSGDHLTSL---------------VDEISYISPPAPPLSQIDDIPPEYFCNGD--NRPPNCG 634
               ...||:.::               .:.|:|.:|..|.|..:       ..:||  |.....|
Yeast   333 ---GEPDHVITVDVVMDNLKNGVNYAFFNNITYTAPKVPTLMTV-------LSSGDQANNSEIYG 387

  Fly   635 PNCECTHMVDIPLGAIVEVVLVDEVQQVNLSHPFHLHGTAFYVVGLGRSPDKSIKKINLKHALEL 699
            .|   ||...:....|||:||.:   |...:|||||||.||..:...|:.|.::.::  .|:.:.
Yeast   388 SN---THTFILEKDEIVEIVLNN---QDTGTHPFHLHGHAFQTIQRDRTYDDALGEV--PHSFDP 444

  Fly   700 DQMGMLERHFSKPPLKDTIAVPNNGYVVIRFRADNPGYWLFHCHFLFHIVIGMNLI 755
            |.......:   |..:||:.|......||||:|||||.|.||||..:|::.|:.|:
Yeast   445 DNHPAFPEY---PMRRDTLYVRPQSNFVIRFKADNPGVWFFHCHIEWHLLQGLGLV 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stwNP_001137606.1 ascorbase 230..756 CDD:274555 148/553 (27%)
CuRO_1_tcLCC2_insect_like 230..333 CDD:259927 43/105 (41%)
CuRO_2_tcLCC_insect_like 352..500 CDD:259951 30/153 (20%)
CuRO_3_tcLLC2_insect_like 599..767 CDD:259972 52/159 (33%)
FET3NP_013774.1 SufI 7..489 CDD:225043 151/566 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 91 1.000 Domainoid score I1742
eggNOG 1 0.900 - - E1_COG2132
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 182 1.000 Inparanoid score I948
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000424
OrthoInspector 1 1.000 - - mtm9215
orthoMCL 1 0.900 - - OOG6_100257
Panther 1 1.100 - - O PTHR11709
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R446
SonicParanoid 1 1.000 - - X253
TreeFam 1 0.960 - -
1110.850

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