DRSC/TRiP Functional Genomics Resources

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Protein Alignment stw and sks14

DIOPT Version :10

Sequence 1:NP_610170.2 Gene:stw / 35494 FlyBaseID:FBgn0286203 Length:784 Species:Drosophila melanogaster
Sequence 2:NP_564697.1 Gene:sks14 / 842005 AraportID:AT1G55560 Length:549 Species:Arabidopsis thaliana


Alignment Length:632 Identity:141/632 - (22%)
Similarity:238/632 - (37%) Gaps:160/632 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   203 TVLGAACQVCT---PNATNTVWSHCQCVLAD-----GVERGILTANRMIPGPSIQVCENDKVVID 259
            |||  .|.|.|   .||.:..:.|...|...     ||.:.::..|...|||::....|:.|||:
plant     7 TVL--VCLVSTVAIVNAGDPYFFHTWNVTYGTASPLGVPQKVILINGQFPGPNLNSTSNNNVVIN 69

  Fly   260 VENHMEGMEVTIHWHGIWQRGSQYYDGVPFVTQCPIQQGNTFRY--QWTGNAGTHFWHAHTGLQK 322
            |.||:: ....:.|.||..|.:.:.|||. .|.|||..|..|.|  |.....|::|::..|.|.:
plant    70 VFNHLD-EPFLLTWSGIQHRKNCWQDGVA-GTSCPIPAGQNFTYHFQPKDQIGSYFYYPTTSLHR 132

  Fly   323 LDGLYGSVVVRQ-----PPSRDPNSHLYDFDLTTHIMLISDWLHEDAAERYPGRLAVNTGQD--- 379
            ..|.:|.:.|..     .|..||..     |.|   :|:.||.       ..|..|:....|   
plant   133 FAGGFGGLRVNSRLLIPVPYADPED-----DYT---VLLGDWY-------TAGHTALKNFLDSGR 182

  Fly   380 ----PESMLINGKGQFRDPNTGFM--TNTPLEIFTITPGRRYRFRMIN-AFASVCPAQVTIEGHG 437
                |..:|||||       :|.:  .|.||  ||:.||:.|::|:.| .|.|.  ....|:.|.
plant   183 TLGLPNGVLINGK-------SGKVGGKNEPL--FTMKPGKTYKYRLCNVGFKST--LNFRIQNHK 236

  Fly   438 MTVIATDGEPVHPVDVNTIISFSGERYDFVISADQPVGAYWI--QLRGLGECGIRRAQQLAILRY 500
            |.::..:|..|...|.:::....|:.:..:::|:|....|::  ..|.|.    :....:.::||
plant   237 MKLVEMEGSHVIQNDYDSLDVHVGQCFSVLVTANQAAKDYYMVASTRFLK----KELSTVGVIRY 297

  Fly   501 ARGPYQPASSPPTYDVGIPQGVVMNPLDAQCNRQRNDAICVSQLKNALEIDRGILAEKPDVKIFL 565
            .....|.::..|...||.                   |..::|                      
plant   298 EGSNVQASTELPKAPVGW-------------------AWSLNQ---------------------- 321

  Fly   566 PFRFFVYR-AEDLFQPNTYNRF------------LVASDADHLISLID--------EVSYISPPS 609
             ||.|.:. ..:..:||....:            ||.|.     |::|        .||::...:
plant   322 -FRSFRWNLTSNAARPNPQGSYHYGKINITRSIKLVNSK-----SVVDGKVRFGFNGVSHVDTET 380

  Fly   610 PM-LSQYNDIPQEYYCNGDNRPVDCGENCQCT---HKIDVPLNAIVEVVLVDEVQQINISHPFHL 670
            |: |::|..:.::.:.....:.....:....|   :.:::.....||::..:..:.:   ..|||
plant   381 PLKLAEYFQMSEKVFKYNVIKDEPAAKITALTVQPNVLNITFRTFVEIIFENHEKTM---QSFHL 442

  Fly   671 HGTSFYVLGL--GR-SPDKQIQRMNLKHALELDQRGLLERQYLKPSLKDTVAVPNNGYAILRFRA 732
            .|.||:.:..  || :|:|: :..||..|:.                :.||.|....::.:....
plant   443 DGYSFFAVASEPGRWTPEKR-ENYNLLDAVS----------------RHTVQVYPKSWSAILLTF 490

  Fly   733 DNPGFWLFHCHFQYHIVIGMNLVFQIGTP----NDLPPVPPNFPRCG 775
            ||.|.|...........:|..|...:.:|    .|...:|.|...||
plant   491 DNAGMWNIRSENLERKYLGEQLYVSVLSPEKSLRDEYNIPLNTNLCG 537

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stwNP_610170.2 ascorbase 230..775 CDD:274555 129/600 (22%)
sks14NP_564697.1 PLN02354 1..549 CDD:177987 141/632 (22%)

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