DRSC/TRiP Functional Genomics Resources

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Protein Alignment stw and SKS6

DIOPT Version :10

Sequence 1:NP_610170.2 Gene:stw / 35494 FlyBaseID:FBgn0286203 Length:784 Species:Drosophila melanogaster
Sequence 2:NP_564479.1 Gene:SKS6 / 840792 AraportID:AT1G41830 Length:542 Species:Arabidopsis thaliana


Alignment Length:592 Identity:136/592 - (22%)
Similarity:225/592 - (38%) Gaps:139/592 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   233 ERGILTANRMIPGPSIQVCENDKVVIDVENHMEGMEVTIHWHGIWQRGSQYYDGVPFVTQCPIQQ 297
            ::||| .|...|||.|....||.::|:|.|.:: ....|.|:|:..|.:.|.||: :.|.|||..
plant    47 QQGIL-INGQFPGPDIHSVTNDNLIINVHNSLD-EPFLISWNGVQNRRNSYVDGM-YGTTCPIPP 108

  Fly   298 GNTFRY--QWTGNAGTHFWHAHTGLQKLDGLYGSV-VVRQP----PSRDPNSHLYDFDLTTHIML 355
            .:.:.|  |.....|:.::.......|..|.:|.: ::.:|    |..||..     |.|   :|
plant   109 RSNYTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRILSRPGIPVPFADPAG-----DYT---VL 165

  Fly   356 ISDWL---HEDAAERYPGRLAVNTGQ---DPESMLINGKGQFRDPNTGFMTNTPLEIFTITPGRR 414
            |.||.   |.|...|      ::.|:   .|:.:||||:      :.|...|       :..|:.
plant   166 IGDWYKFNHTDLKSR------LDRGRKLPSPDGILINGR------SNGATLN-------VEQGKT 211

  Fly   415 YRFRMINAFASVCPAQVTIEGHGMTVIATDGEPVHPVDVNTIISFSGERYDFVISADQPVGAYWI 479
            ||.|:.|. .........|:.|.|.::..:|........:::....|:.|..:|:|||....|::
plant   212 YRLRISNV-GLQDSLNFRIQNHRMKLVEVEGTHTLQTMFSSLDVHVGQSYSVLITADQSPRDYYV 275

  Fly   480 QLRGLGECGIRRAQQL----AILRYARGPYQPASSPPTYDVGIPQGVVMNPLDAQCNRQRNDAIC 540
            .:..      |...::    .:|||: |...|||.|      ||.|..:. :|...|:.|     
plant   276 VVSS------RFTDKIITTTGVLRYS-GSSTPASGP------IPGGPTIQ-VDWSLNQAR----- 321

  Fly   541 VSQLKNALEIDRGILAEKPDVKIFLPFRFFVYRAEDLFQPN---TYNRFLV--------ASDADH 594
                    .|...:.|..|                   :||   :|:..|:        .|.|..
plant   322 --------AIRTNLTASGP-------------------RPNPQGSYHYGLIPLIRTIVFGSSAGQ 359

  Fly   595 LISL----IDEVSYISPPSPM-LSQYNDIPQEYYCNGDNRPVDCGENCQCTHKIDVPLNAIVEVV 654
            :...    ::.||::...:|: |:.:..|...|..|..:.....|.....|..:.|.....:|:|
plant   360 INGKQRYGVNSVSFVPADTPLKLADFFKISGVYKINSISDKPTYGGLYLDTSVLQVDYRTFIEIV 424

  Fly   655 LVDEVQQINISHPFHLHGTSFYVLGLGRSPDKQIQR--MNLKHALELDQRGLLERQYLKPSLKDT 717
            ..:   |.:|...:||:|.||:|:|:.....|...|  .||:.|:.                :.|
plant   425 FEN---QEDIVQSYHLNGYSFWVVGMDGGQWKTGSRNGYNLRDAVS----------------RST 470

  Fly   718 VAVPNNGYAILRFRADNPGFWLFHCHFQYHIVIGMNLVFQIGTPN----DLPPVPPNFPRC---- 774
            |.|....:..:....||.|.|.....|.....:|..|..::.|.:    |..|:|.|...|    
plant   471 VQVYPKSWTAIYIALDNVGMWNLRSEFWARQYLGQQLYLRVFTSSTSLRDEYPIPKNSRLCGRAR 535

  Fly   775 GNHLPPI 781
            |.|..|:
plant   536 GRHTRPL 542

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stwNP_610170.2 ascorbase 230..775 CDD:274555 133/584 (23%)
SKS6NP_564479.1 PLN02991 12..539 CDD:215536 134/587 (23%)

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