DRSC/TRiP Functional Genomics Resources

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Protein Alignment stw and sks3

DIOPT Version :10

Sequence 1:NP_610170.2 Gene:stw / 35494 FlyBaseID:FBgn0286203 Length:784 Species:Drosophila melanogaster
Sequence 2:NP_199656.2 Gene:sks3 / 834900 AraportID:AT5G48450 Length:621 Species:Arabidopsis thaliana


Alignment Length:576 Identity:133/576 - (23%)
Similarity:231/576 - (40%) Gaps:94/576 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   231 GVERGILTANRMIPGPSIQVCENDKVVIDVENHMEGMEVTIHWHGIWQRGSQYYDGVPFVTQCPI 295
            |..:.::..|...|||.:.|..|..||::|:|::: ..:.:.|:||..|.:.:.||| ..|.|||
plant    44 GTRQQVIGINGQFPGPILNVTTNWNVVMNVKNNLD-EPLLLTWNGIQHRKNSWQDGV-LGTNCPI 106

  Fly   296 QQG-N-TFRYQWTGNAGTHFWHAHTGLQKLDGLYGSVVVRQPPSRDPNSHLYDFDLTTHIMLISD 358
            ..| | |:.:|.....|:.|:...|..|:..|.||.::|...........|.|.|:|   :.|||
plant   107 PSGWNWTYEFQVKDQIGSFFYFPSTNFQRASGGYGGIIVNNRAIIPVPFALPDGDVT---LFISD 168

  Fly   359 W-------LHEDAAERYPGRLAVNTGQDPESMLINGKGQFRDPNTGFMTNTPLEIFTITPGRRYR 416
            |       |.:|...:       |..:.|:.::|||.|.|..      ..:|.....:.|||.||
plant   169 WYTKSHKKLRKDVESK-------NGLRPPDGIVINGFGPFAS------NGSPFGTINVEPGRTYR 220

  Fly   417 FRMINAFASVCPAQVTIEGHGMTVIATDGEPVHPVDVNTIISFSGERYDFVISADQPVGA--YWI 479
            ||:.|: .........|:.|.:.::.|:|......:...:....|:.:.|:::.||. |:  |:|
plant   221 FRVHNS-GIATSLNFRIQNHNLLLVETEGSYTIQQNYTNMDIHVGQSFSFLVTMDQS-GSNDYYI 283

  Fly   480 QLRGLGECGIRRAQQLAILRYARGPYQPASSPPTYDVGIPQGVVMNPLDAQCNRQRNDAICVSQL 544
            .........| :|..:|:|||:.. ..|||.|      :|.    .|::.......|.|      
plant   284 VASPRFATSI-KASGVAVLRYSNS-QGPASGP------LPD----PPIELDTFFSMNQA------ 330

  Fly   545 KNALEIDRGILAEKPDVKIFLPFRFFVYRAEDLFQPNTYNRFLVASDADHLI-----SLIDEVSY 604
             .:|.::....|.:|:     |...|.|.     |....:.:::.:....:|     :.::.:||
plant   331 -RSLRLNLSSGAARPN-----PQGSFKYG-----QITVTDVYVIVNRPPEMIEGRLRATLNGISY 384

  Fly   605 ISPPSPM-LSQYNDIPQEYYCNGDNRPVDCGENCQCTHKIDVPLNAIVEVVLVDEVQQINISHPF 668
            :.|.:|: |:|..:|...|..:...||::...... |..|:......||::..:....:.   .:
plant   385 LPPATPLKLAQQYNISGVYKLDFPKRPMNRHPRVD-TSVINGTFKGFVEIIFQNSDTTVK---SY 445

  Fly   669 HLHGTSFYVLGL--GRSPDKQIQRMNLKHALELDQRGLLERQYLKPSLKDTVAVPNNGYAILRFR 731
            ||.|.:|:|:|:  |...:......|...|:                .:.|..|....:..:...
plant   446 HLDGYAFFVVGMDFGLWTENSRSTYNKGDAV----------------ARSTTQVFPGAWTAVLVS 494

  Fly   732 ADNPGFWLFHCHFQYHIVIGMNLVFQIGTPN-DLP----PVPPNFPRCGNHLPPIK 782
            .||.|.|...........:|..|...:..|. |:.    .||.|...|| .|.|::
plant   495 LDNAGMWNLRIDNLASWYLGQELYLSVVNPEIDIDSSENSVPKNSIYCG-RLSPLQ 549

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stwNP_610170.2 ascorbase 230..775 CDD:274555 129/567 (23%)
sks3NP_199656.2 PLN00044 17..559 CDD:165622 133/576 (23%)

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