DRSC/TRiP Functional Genomics Resources

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Protein Alignment stw and AT5G21105

DIOPT Version :9

Sequence 1:NP_001137606.1 Gene:stw / 35494 FlyBaseID:FBgn0286203 Length:784 Species:Drosophila melanogaster
Sequence 2:NP_680176.5 Gene:AT5G21105 / 832235 AraportID:AT5G21105 Length:588 Species:Arabidopsis thaliana


Alignment Length:644 Identity:185/644 - (28%)
Similarity:268/644 - (41%) Gaps:170/644 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   195 YHFTLEYYTVLGAACQVCTPNATNTVWSHCQCVLADGVERGILTANRMIPGPSIQVCENDKVVID 259
            ||:.:||                 ..||      .|..|..::|.|...|||:|:....|.:|::
plant    40 YHWEVEY-----------------KYWS------PDCKEGAVMTVNGEFPGPTIKAFAGDTIVVN 81

  Fly   260 VENHMEGMEVTIHWHGIWQRGSQYYDGVPFVTQCPIQQGNTFRYQWT-GNAGTHFWHAHTGLQKL 323
            :.|.:....:.||||||.|.||.:.||...||||.|..|.||.|.:| ...||||:|.|.|:|:.
plant    82 LTNKLTTEGLVIHWHGIRQFGSPWADGAAGVTQCAINPGETFTYNFTVEKPGTHFYHGHYGMQRS 146

  Fly   324 DGLYGSVVVRQPPSRDPNSHLYDFDLTTHIMLISDWLHE----------DAAERYPGRLAVNTGQ 378
            .|||||::|.....:..... ||.:..   :|:|||.||          ....|:.|        
plant   147 AGLYGSLIVDVAKGKSERLR-YDGEFN---LLLSDWWHEAIPSQELGLSSKPMRWIG-------- 199

  Fly   379 DPESMLINGKGQFR-DPNTGFMTNTPL-------------EIFTITPGRRYRFRM--INAFASVC 427
            :.:|:||||:|||. .....|..||.|             :|..:.|.:.||.|:  ..|.||: 
plant   200 EAQSILINGRGQFNCSLAAQFSNNTSLPMCTFKEGDQCAPQILHVEPNKTYRIRLSSTTALASL- 263

  Fly   428 PAQVTIEGHGMTVIATDGEPVHPVDVNTIISFSGERYDFVISADQ-PVGAYWIQLRGLGECGIR- 490
              .:.::||.:.|:..||..:.|...:.|..:|||.|..:::.|| |...|:|.:      |:| 
plant   264 --NLAVQGHKLVVVEADGNYITPFTTDDIDIYSGESYSVLLTTDQDPSQNYYISV------GVRG 320

  Fly   491 ----RAQQLAILRYARGPYQ--PASSPPT---YDVGIPQGVILNPLDAICDRKRADAVCVSNLKN 546
                ..|.|.||.|...|..  |:|.||.   :|                |.:|:        ||
plant   321 RKPNTTQALTILNYVTAPASKLPSSPPPVTPRWD----------------DFERS--------KN 361

  Fly   547 -AKKVDKGVLVERPDVKIFLPFRFFVYEPKALFIPNTYNRFLVVPSGDHLTS-LVDEISYISPPA 609
             :||:...:....|..|    :|      |.|.:.||.|..      |..|. .::.:|.::|..
plant   362 FSKKIFSAMGSPSPPKK----YR------KRLILLNTQNLI------DGYTKWAINNVSLVTPAT 410

  Fly   610 PPLSQI----------DDIPPEYFCNGD--NRPPNCGPNCECTHMVDI-PLGAIVEVVLVDEVQQ 661
            |.|..:          ...|..|..:.|  |.||  .||....:.:.: |....|:|:    :|.
plant   411 PYLGSVKYNLKLGFNRKSPPRSYRMDYDIMNPPP--FPNTTTGNGIYVFPFNVTVDVI----IQN 469

  Fly   662 VNL-------SHPFHLHGTAFYVVGLGR---SPDKSIKKINLKHALELDQMGMLERHFSKPPLKD 716
            .|:       .||:||||..|:|:|.|.   .|....|..|||:                |||::
plant   470 ANVLKGIVSEIHPWHLHGHDFWVLGYGDGKFKPGIDEKTYNLKN----------------PPLRN 518

  Fly   717 TIAVPNNGYVVIRFRADNPGYWLFHCHFLFHIVIGMNLIFHIGTTADLPPVPPRFPTCG 775
            |..:...|:..|||..||||.|.||||...|:.:||.::|..|... :..||.....||
plant   519 TAILYPYGWTAIRFVTDNPGVWFFHCHIEPHLHMGMGVVFAEGLNR-IGKVPDEALGCG 576

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stwNP_001137606.1 ascorbase 230..756 CDD:274555 173/588 (29%)
CuRO_1_tcLCC2_insect_like 230..333 CDD:259927 45/103 (44%)
CuRO_2_tcLCC_insect_like 352..500 CDD:259951 50/179 (28%)
CuRO_3_tcLLC2_insect_like 599..767 CDD:259972 54/190 (28%)
AT5G21105NP_680176.5 PLN02191 15..588 CDD:177843 185/644 (29%)
Cupredoxin 38..157 CDD:302766 52/139 (37%)
Cupredoxin 168..334 CDD:302766 51/185 (28%)
CuRO_3_AAO 381..569 CDD:259960 61/216 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 120 1.000 Domainoid score I1881
eggNOG 1 0.900 - - E1_COG2132
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H136665
Inparanoid 1 1.050 220 1.000 Inparanoid score I1206
OMA 1 1.010 - - QHG58299
OrthoDB 1 1.010 - - D454773at2759
OrthoFinder 1 1.000 - - FOG0000424
OrthoInspector 1 1.000 - - mtm1062
orthoMCL 1 0.900 - - OOG6_100257
Panther 1 1.100 - - O PTHR11709
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X253
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.840

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