DRSC/TRiP Functional Genomics Resources

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Protein Alignment stw and AT5G01050

DIOPT Version :9

Sequence 1:NP_001137606.1 Gene:stw / 35494 FlyBaseID:FBgn0286203 Length:784 Species:Drosophila melanogaster
Sequence 2:NP_195725.1 Gene:AT5G01050 / 831812 AraportID:AT5G01050 Length:586 Species:Arabidopsis thaliana


Alignment Length:603 Identity:171/603 - (28%)
Similarity:245/603 - (40%) Gaps:140/603 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   233 ERGILTANRMIPGPSIQVCENDKVVIDVENHMEGMEVTIHWHGIWQRGSQYYDGVPFVTQCPIQQ 297
            |:.|...|..:|||:|.|.|.|.:|:.|.| .....|||||||::|..|.:.||...:||||||.
plant    45 EQMIPIVNGSLPGPTINVREGDTLVVHVIN-KSTYNVTIHWHGVFQLKSVWMDGANMITQCPIQP 108

  Fly   298 GNTFRYQW--TGNAGTHFWHAHTGLQKLDGLYGSVVVRQPPSRDPNSHLYDFDLT-THIMLI-SD 358
            .|.|.||:  ||..||..||||. :.....::|::::| |.|..|    |.|... ..:.|| ..
plant   109 SNNFTYQFDITGQEGTLLWHAHV-VNLRATIHGALIIR-PRSGRP----YPFPKPYKEVPLIFQQ 167

  Fly   359 WLHEDA--AERYPGRLAVNTGQDPESMLING-KGQFRDPNTGFMTNTPLEIFTITPGRRYRFRMI 420
            |...|.  .|..|..::       ::.|||| .|.....:...|.|     ..:..|:.|..|:|
plant   168 WWDTDVRLLELRPAPVS-------DAYLINGLAGDSYPCSKNRMFN-----LKVVQGKTYLLRII 220

  Fly   421 NAFASVCPAQVTIEGHGMTVIATDGEPVHPVDVNTIISFSGERYDFVISADQPVGAYWIQLRGLG 485
            || |........|..|.:||:|.|.....|...:.:|...|:..|.:::||||:|.|:       
plant   221 NA-ALNTHLFFKIANHNVTVVAVDAVYTTPYLTDVMILTPGQTIDAILTADQPIGTYY------- 277

  Fly   486 ECGIRRAQQLAILRY--------------ARG--PYQPASS---------PPTYDV--------- 516
                     :||:.|              .||  .|:.|:|         ||..|:         
plant   278 ---------MAIIPYFSAIGVPASPDTKPTRGLIVYEGATSSSSPTKPWMPPANDIPTAHRFSSN 333

  Fly   517 --GIPQGVILNPLDAICDRKRADAV------CVSNLKNAKKVDKGVLVERPDVKIFLPFRFFVYE 573
              .:..|....|:....|.|....:      |.||.|....:|:.:.....:....:|.|..:.|
plant   334 ITSLVGGPHWTPVPRHVDEKMFITMGLGLDPCPSNAKCVGPLDQRLAGSLNNRTFMIPERISMQE 398

  Fly   574 PKALFIPNTYNRFLVVPSGDHLTSLVDEISYISPPAPPLSQIDDIPPEYFCNGDNRPPNCG---- 634
            .....|...|               .|:.    |..||| :.|      |...:..|.|..    
plant   399 AYFYNITGVY---------------TDDF----PDQPPL-KFD------FTKFEQHPTNSDMEMM 437

  Fly   635 -PNCECTHMVDIPLGAIVEVVLVDEVQQVNLSHPFHLHGTAFYVVGLG---RSPDKSIKKINLKH 695
             |..: |.:..|...:.||:||.:.......|||.||||..|||:|.|   ..|.:..:|:||  
plant   438 FPERK-TSVKTIRFNSTVEIVLQNTGILTPESHPMHLHGFNFYVLGYGFGNYDPIRDARKLNL-- 499

  Fly   696 ALELDQMGMLERHFSKPPLKDTIAVPNNGYVVIRFRADNPGYWLFHCHFLFHIVIGMNLIFHI-- 758
                          ..|.:.:|:.||..|:||:||.|:|||.||||||...|:.:|:.:.|.:  
plant   500 --------------FNPQMHNTVGVPPGGWVVLRFIANNPGIWLFHCHMDAHLPLGIMMAFIVQN 550

  Fly   759 GTTAD--LPPVPPRFPTC 774
            |.|.:  ||..|...|.|
plant   551 GPTRETSLPSPPSNLPQC 568

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stwNP_001137606.1 ascorbase 230..756 CDD:274555 163/579 (28%)
CuRO_1_tcLCC2_insect_like 230..333 CDD:259927 43/101 (43%)
CuRO_2_tcLCC_insect_like 352..500 CDD:259951 38/151 (25%)
CuRO_3_tcLLC2_insect_like 599..767 CDD:259972 58/179 (32%)
AT5G01050NP_195725.1 laccase 25..568 CDD:274556 170/601 (28%)
CuRO_1_LCC_plant 30..146 CDD:259918 44/103 (43%)
CuRO_2_LCC_plant 161..304 CDD:259943 41/171 (24%)
CuRO_3_LCC_plant 407..551 CDD:259964 55/186 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 85 1.000 Domainoid score I2814
eggNOG 1 0.900 - - E1_COG2132
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D454773at2759
OrthoFinder 1 1.000 - - FOG0000424
OrthoInspector 1 1.000 - - mtm1062
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11709
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X253
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
98.880

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