DRSC/TRiP Functional Genomics Resources

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Protein Alignment stw and LAC10

DIOPT Version :9

Sequence 1:NP_001137606.1 Gene:stw / 35494 FlyBaseID:FBgn0286203 Length:784 Species:Drosophila melanogaster
Sequence 2:NP_195739.2 Gene:LAC10 / 831697 AraportID:AT5G01190 Length:558 Species:Arabidopsis thaliana


Alignment Length:629 Identity:163/629 - (25%)
Similarity:258/629 - (41%) Gaps:117/629 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   189 PPRICYYHFTLEYYTVLGAACQVCTPN-ATNTVWSHCQCVLADGVERGILTANRMIPGPSIQVCE 252
            |.||......|.:...:..|.:..|.| .|..|...|.       .:.|:|.|...|||:|...|
plant     4 PIRILVLFALLAFPACVHGAIRKYTFNVVTKQVTRICS-------TKQIVTVNGKFPGPTIYANE 61

  Fly   253 NDKVVIDVENHMEGMEVTIHWHGIWQRGSQYYDGVPFVTQCPIQQGNTFRYQW--TGNAGTHFWH 315
            :|.::::|.|::: ..|:||||||.|..:.:.||..::|||||:.|:::.|.:  ||..||.:||
plant    62 DDTILVNVVNNVK-YNVSIHWHGIRQLRTGWADGPAYITQCPIKPGHSYVYNFTVTGQRGTLWWH 125

  Fly   316 AHTGLQKLDGLYGSVVVRQP---PSRDPNSHLYDFDLTTHIMLISDWLHEDAA----ERYPGRLA 373
            ||. |.....::|::|:...   |...|..|      ...::::.:|...|..    |.....||
plant   126 AHV-LWLRATVHGAIVILPKLGLPYPFPKPH------REEVIILGEWWKSDTETVVNEALKSGLA 183

  Fly   374 VNTGQDPESMLINGKGQFRDPNTGFMTNTPLE---IFTITPGRRYRFRMINAFASVCPAQVTIEG 435
            .|..   ::.:|||       :.||:.|.|.:   ...:..|:.|..|:|||..:. .....|.|
plant   184 PNVS---DAHVING-------HPGFVPNCPSQGNFKLAVESGKTYMLRLINAALNE-ELFFKIAG 237

  Fly   436 HGMTVIATDGEPVHPVDVNTIISFSGERYDFVISADQPVGAYWIQLRGLGECGI-----RRAQQL 495
            |..||:..|...|.|.:.:||:...|:....::||.:|.|.|.|......:..:     |.|  .
plant   238 HRFTVVEVDAVYVKPFNTDTILIAPGQTTTALVSAARPSGQYLIAAAPFQDSAVVAVDNRTA--T 300

  Fly   496 AILRY----ARGPYQPASSPPTYDVGIPQGVILNPLDAICDRKRADAVCVSNLKNAKKVDKGVLV 556
            |.:.|    :..|.:..|.||.....: ....:|.|.::               |:|.....|.:
plant   301 ATVHYSGTLSATPTKTTSPPPQNATSV-ANTFVNSLRSL---------------NSKTYPANVPI 349

  Fly   557 ERPDVKIFLPFRFFVYEPKALF-IPNTYNRFLVVPSGD--HLTSLVDEISYISPPAPPLS----- 613
                          ..:...|| :....||.....:|:  .:.:.::.|::..|....|.     
plant   350 --------------TVDHDLLFTVGLGINRCHSCKAGNFSRVVAAINNITFKMPKTALLQAHYFN 400

  Fly   614 ----QIDDIP--PEYFCNGDNRPPNCGPNCECTHMVDIPLGAIVEVVLVDEVQQVNLSHPFHLHG 672
                ...|.|  |....:...:||:.....:.|.:..:|..:.|:|||.|.......:||.||||
plant   401 LTGIYTTDFPAKPRRVFDFTGKPPSNLATMKATKLYKLPYNSTVQVVLQDTGNVAPENHPIHLHG 465

  Fly   673 TAFYVVGLGR---SPDKSIKKINLKHALELDQMGMLERHFSKPPLKDTIAVPNNGYVVIRFRADN 734
            ..|:|||||.   :..|...|.||...:|                ::|:.||:.|:..|||||||
plant   466 FNFFVVGLGTGNYNSKKDSNKFNLVDPVE----------------RNTVGVPSGGWAAIRFRADN 514

  Fly   735 PGYWLFHCHFLFHIVIGMNLIFHI----GTTADLPPVPPRFPTC 774
            ||.|..|||...|...|:.:.|.:    |....:.|.|...|.|
plant   515 PGVWFMHCHLEVHTTWGLKMAFLVENGKGPNQSIRPPPSDLPKC 558

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stwNP_001137606.1 ascorbase 230..756 CDD:274555 147/563 (26%)
CuRO_1_tcLCC2_insect_like 230..333 CDD:259927 39/104 (38%)
CuRO_2_tcLCC_insect_like 352..500 CDD:259951 39/159 (25%)
CuRO_3_tcLLC2_insect_like 599..767 CDD:259972 53/185 (29%)
LAC10NP_195739.2 laccase 22..558 CDD:274556 158/609 (26%)
CuRO_1_LCC_plant 27..143 CDD:259918 44/124 (35%)
CuRO_2_LCC_plant 158..305 CDD:259943 39/159 (25%)
CuRO_3_LCC_plant 404..541 CDD:259964 49/152 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 85 1.000 Domainoid score I2814
eggNOG 1 0.900 - - E1_COG2132
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D454773at2759
OrthoFinder 1 1.000 - - FOG0000424
OrthoInspector 1 1.000 - - mtm1062
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11709
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X253
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
109.880

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