DRSC/TRiP Functional Genomics Resources

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Protein Alignment stw and LAC13

DIOPT Version :9

Sequence 1:NP_001137606.1 Gene:stw / 35494 FlyBaseID:FBgn0286203 Length:784 Species:Drosophila melanogaster
Sequence 2:NP_196330.3 Gene:LAC13 / 830604 AraportID:AT5G07130 Length:569 Species:Arabidopsis thaliana


Alignment Length:607 Identity:156/607 - (25%)
Similarity:245/607 - (40%) Gaps:151/607 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   237 LTANRMIPGPSIQVCENDKVVIDVENHMEGMEVTIHWHGIWQRGSQYYDGVPFVTQCPIQQGNTF 301
            :|.|...|||:::|...|.:||...|... ..:::|||||.|..:.:.||..::||||||.|.::
plant    45 ITVNGQFPGPTLEVRNGDSLVITAINKAR-YNISLHWHGIRQMRNPWADGPEYITQCPIQPGGSY 108

  Fly   302 RYQWT--GNAGTHFWHAHTGLQKLDGLYGSVVVRQPPSRDPNSHLYDF------DLTTHIMLISD 358
            .|::|  ...||.:||||:...:.. :||::::| ||...|:   |.|      ::|   :|:.:
plant   109 TYRFTMEDQEGTLWWHAHSRWLRAT-VYGALIIR-PPLSSPH---YPFPVIPKREIT---LLLGE 165

  Fly   359 WLHEDAAERYPG---RLAVNTGQDP---ESMLINGKGQFRDPNTGFMTNTPLEI-FTITPGRRYR 416
            |.     :|.|.   .||..||..|   ::..|||:     |...:..::...: |.:..|....
plant   166 WW-----DRNPMDVLNLAQFTGAAPNISDAFTINGQ-----PGDLYRCSSQETLRFLVGSGEIVL 220

  Fly   417 FRMINA------FASVCPAQVTIEGHGMTVIATDGEPVHPVDVNTIISFSGERYDFVISADQPVG 475
            .|:||:      |..|.       .|.:||:|.|.....|...|.|:...|:..|.:::||||..
plant   221 LRVINSALNQELFFGVA-------NHKLTVVAADASYTKPFSTNVIMLGPGQTTDVLLTADQPPA 278

  Fly   476 AYWIQLRGLGECGIRRAQQLAILRYARGPYQPASSPPTYDVGIPQGVILNPLDAICDRKRADAVC 540
            .|::                     |...|..|::  .:|......::          |..||.|
plant   279 HYYM---------------------AAHAYNSANA--AFDNTTTTAIL----------KYKDASC 310

  Fly   541 VSNLKNAKKVDKGVLVERP---DVKIFLPFRFFVYEPKALFIPNTY--NRFLVV----------- 589
            |:  ..||...:.:..:.|   |......|...:..|..:.:|...  |.|..|           
plant   311 VT--LQAKSQARAIPAQLPGFNDTATAAAFTAQMKSPSKVKVPLEIDENLFFTVGLGLFNCPTPN 373

  Fly   590 ------PSGDHLTSLVDEISYISPPAPPLSQ-----------IDDIPP------EYFCNGDNR-- 629
                  |:|...|:.::.:|::.|....:.|           ..|.||      :|..|....  
plant   374 TQRCQGPNGTRFTASINNVSFVFPKQNSIMQAYYQGTPTGVFTTDFPPTPPVTFDYTGNVSRGLW 438

  Fly   630 PPNCGPNCECTHMVDIPLGAIVEVVLVDEVQQVNLSHPFHLHGTAFYVVGLG---RSPDKSIKKI 691
            .|..|     |....:...:.|:::|.|.......:||.||||..|||||.|   .:|:......
plant   439 QPTRG-----TKAYKLKFNSQVQIILQDTSIVTTENHPMHLHGYEFYVVGTGVGNFNPNTDTSSF 498

  Fly   692 NLKHALELDQMGMLERHFSKPPLKDTIAVPNNGYVVIRFRADNPGYWLFHCHFLFHIVIGMNLIF 756
            ||     :|           ||.::||..|..|:|.|||.|:|||.||.|||...||..|:.::|
plant   499 NL-----ID-----------PPRRNTIGTPPGGWVAIRFVANNPGAWLMHCHIDSHIFWGLAMVF 547

  Fly   757 HI----GTTADLPPVPPRFPTC 774
            .:    |....:...|...|.|
plant   548 LVENGEGHLQSVQSPPLDLPQC 569

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stwNP_001137606.1 ascorbase 230..756 CDD:274555 151/583 (26%)
CuRO_1_tcLCC2_insect_like 230..333 CDD:259927 35/97 (36%)
CuRO_2_tcLCC_insect_like 352..500 CDD:259951 35/160 (22%)
CuRO_3_tcLLC2_insect_like 599..767 CDD:259972 54/193 (28%)
LAC13NP_196330.3 laccase 21..569 CDD:274556 155/605 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 85 1.000 Domainoid score I2814
eggNOG 1 0.900 - - E1_COG2132
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D454773at2759
OrthoFinder 1 1.000 - - FOG0000424
OrthoInspector 1 1.000 - - mtm1062
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11709
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X253
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
98.880

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