DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment stw and AT4G39830

DIOPT Version :10

Sequence 1:NP_610170.2 Gene:stw / 35494 FlyBaseID:FBgn0286203 Length:784 Species:Drosophila melanogaster
Sequence 2:NP_195693.1 Gene:AT4G39830 / 830142 AraportID:AT4G39830 Length:582 Species:Arabidopsis thaliana


Alignment Length:603 Identity:184/603 - (30%)
Similarity:268/603 - (44%) Gaps:131/603 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   230 DGVERGILTANRMIPGPSIQVCENDKVVIDVENHMEGMEVTIHWHGIWQRGSQYYDGVPFVTQCP 294
            |..|:.::|.|...|||:|:..:.|.:|::::|......|.:|||||.|.|:.::|||..|||||
plant    50 DCFEKLVITINGKFPGPTIKAQQGDTIVVELKNSFMTENVAVHWHGIRQIGTPWFDGVEGVTQCP 114

  Fly   295 IQQGNTFRYQW-TGNAGTHFWHAHTGLQKLDGLYGSVVVRQPPSRDPNSHLYDFDLTTHIMLISD 358
            |..|..|.||: ....||:.:|:|.|:|:..||.|.:.| .||:.:|....||:|..   .|::|
plant   115 ILPGEVFIYQFVVDRPGTYMYHSHYGMQRESGLIGMIQV-SPPATEPEPFTYDYDRN---FLLTD 175

  Fly   359 WLHEDAAERYPGRLAVN---TGQDPESMLINGKGQFRDPNTGFMTNTP---------------LE 405
            |.|:..:|:..|..::.   .| :|:|::|.|:|:|...|.  :|..|               ..
plant   176 WYHKSMSEKATGLASIPFKWVG-EPQSLMIQGRGRFNCSNN--LTTPPSLVSGVCNVSNADCSRF 237

  Fly   406 IFTITPGRRYRFRMINAFASVCPAQVTIEGHGMTVIATDGEPVHPVDVNTIISFSGERYDFVISA 470
            |.|:.||:.||.| |.:..::......||||.:||:..||..|.|..|..:..:|||.|..::.|
plant   238 ILTVIPGKTYRLR-IGSLTALSALSFQIEGHNLTVVEADGHYVEPFTVKNLFVYSGETYSVLLKA 301

  Fly   471 DQ-PVGAYWIQLRGLGECGIRRAQQLAILRYARGPYQPASSPPTYDVG--IPQGVVMNPLDAQCN 532
            || |...||| ...:...........|:|.|.  |..|...|||.:..  :|:.           
plant   302 DQNPRRNYWI-TSSIVSRPATTPPATAVLNYY--PNHPRRRPPTSESSNIVPEW----------- 352

  Fly   533 RQRNDAICVSQLKNALEID--RGI---LAEKPDVKIFLPFRFFVYRAEDLFQPNTYNRFLVASDA 592
               ||.  .|:|..:|.|.  ||.   |.|..|..|.|        .....:.|.|.|:.|    
plant   353 ---NDT--RSRLAQSLAIKARRGFIHALPENSDKVIVL--------LNTQNEVNGYRRWSV---- 400

  Fly   593 DHLISLIDEVSYISPPSPMLSQYND-----------IPQEYYCNGDNRPVD-----CGENCQCTH 641
                   :.|||..|.:|.|.....           .|:.|    |:|..|     ...|...:.
plant   401 -------NNVSYHHPKTPYLIALKQNLTNAFDWRFTAPENY----DSRNYDIFAKPLNANATTSD 454

  Fly   642 KI-DVPLNAIVEVVLVDEVQQINI-------SHPFHLHGTSFYVLGLG-----RSPD-KQIQRMN 692
            .| .:..|:.|:|:|    |..|.       :||:||||..|:|||.|     .|.| |:..|::
plant   455 GIYRLRFNSTVDVIL----QNANTMNANNSETHPWHLHGHDFWVLGYGEGKFNESEDPKRYNRVD 515

  Fly   693 LKHALELDQRGLLERQYLKPSLKDTVAVPNNGYAILRFRADNPGFWLFHCHFQYHIVIGMNLVFQ 757
                               |..|:||||...|:..|||||||||.|.||||.:.|..:||.:||:
plant   516 -------------------PIKKNTVAVQPFGWTALRFRADNPGVWSFHCHIESHFFMGMGIVFE 561

  Fly   758 IGTPNDLPPVPPNFPRCG 775
            .|. :.:..:|.:...||
plant   562 SGI-DKVSSLPSSIMGCG 578

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stwNP_610170.2 ascorbase 230..775 CDD:274555 182/601 (30%)
AT4G39830NP_195693.1 PLN02604 10..582 CDD:215324 184/603 (31%)

Return to query results.
Submit another query.