DRSC/TRiP Functional Genomics Resources

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Protein Alignment stw and SKU5

DIOPT Version :10

Sequence 1:NP_610170.2 Gene:stw / 35494 FlyBaseID:FBgn0286203 Length:784 Species:Drosophila melanogaster
Sequence 2:NP_192979.1 Gene:SKU5 / 826851 AraportID:AT4G12420 Length:587 Species:Arabidopsis thaliana


Alignment Length:625 Identity:142/625 - (22%)
Similarity:243/625 - (38%) Gaps:127/625 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   184 CREGEPPRICYYHFTLEYYTVLGAACQVCTPNATNTVWSHCQCVLADGVERGILTANRMIPGPSI 248
            |...:|  ..:|:|.:.|.|        .:|.               ||.:.::..|...|||:|
plant    18 CFAADP--YSFYNFEVSYIT--------ASPL---------------GVPQQVIAINGKFPGPTI 57

  Fly   249 QVCENDKVVIDVENHM-EGMEVTIHWHGIWQRGSQYYDGVPFVTQCPI--QQGNTFRYQWTGNAG 310
            .|..|:.:|::|.|.: ||:  .:||:||.||...:.||| ..|.|||  :...|:.:|.....|
plant    58 NVTTNENLVVNVRNKLDEGL--LLHWNGIQQRRVSWQDGV-LGTNCPIPPKWNWTYEFQVKDQIG 119

  Fly   311 THFWHAHTGLQKLDGLYGSVVVR-----QPPSRDPNSHLYDFDLTTHIMLISDWLHEDAAERYPG 370
            :.|:......|:..|.:||.||.     ..|...|     |.|:|   :.|.||...:....   
plant   120 SFFYFPSLHFQRASGGFGSFVVNPRAIIPVPFSTP-----DGDIT---VTIGDWYIRNHTAL--- 173

  Fly   371 RLAVNTGQD---PESMLINGKGQFRDPNTGFMTNTPLEIFTITPGRRYRFRMINAFASVCPAQVT 432
            |.|::.|:|   |:.:||||||.:|..:|........|..|:.||:.||.|:.|...|. .....
plant   174 RKALDDGKDLGMPDGVLINGKGPYRYNDTLVADGIDFETITVHPGKTYRLRVSNVGIST-SLNFR 237

  Fly   433 IEGHGMTVIATDGEPVHPVDVNTIISFSGERYDFVISADQPVGA-YWI--QLRGLGECGIRRAQQ 494
            |:||.:.:..::|......:..::....|:.|.|:::.||...: |:|  ..|.:.|...||...
plant   238 IQGHNLVLAESEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASSDYYIVASARVVNETIWRRVTG 302

  Fly   495 LAILRY------ARGPYQPASS---PPTYDVGIPQGVVMN--PLDAQCNRQ---RNDAICVSQLK 545
            :.||:|      |:|...|...   ..|:.:...:.:..|  ...|:.|.|   :..:|.|:   
plant   303 VGILKYTNSKGKAKGQLPPGPQDEFDKTFSMNQARSIRWNVSASGARPNPQGSFKYGSINVT--- 364

  Fly   546 NALEIDRGILAEKPDVKIFLPFRFFVYRAEDLFQPNTYNRFLVASDADHLISLIDEVSYISPPSP 610
                 |..:|...|.|.|....|                            :.::.:|:.:|.:|
plant   365 -----DVYVLRNMPPVTISGKRR----------------------------TTLNGISFKNPSTP 396

  Fly   611 M-LSQYNDIPQEYYCNGDNRPVDCGENCQCTHKIDVPLNAIVEVVLVDEVQQINISHPFHLHGTS 674
            : |:....:...|..:...||: .|.....|..|:......:||||.:...::   ..:|:.|.:
plant   397 IRLADKLKVKDVYKLDFPKRPL-TGPAKVATSIINGTYRGFMEVVLQNNDTKM---QSYHMSGYA 457

  Fly   675 FYVLGLGRSPDKQIQRMNLKHALELDQRGLLERQYLKPSLKDTVAVPNNGYAILRFRADNPGFWL 739
            |:|:|:......:            :.||...:  .....:.|:.|....::.:....||||.|.
plant   458 FFVVGMDYGEWTE------------NSRGTYNK--WDGIARSTIQVYPGAWSAILISLDNPGAWN 508

  Fly   740 FHCHFQYHIVIGMNLVFQIGTPNDLPPV----PPNFPRCG 775
            ..........:|.....::..|::....    |.|...||
plant   509 LRTENLDSWYLGQETYVRVVNPDENNKTEFGHPDNVLYCG 548

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stwNP_610170.2 ascorbase 230..775 CDD:274555 133/577 (23%)
SKU5NP_192979.1 PLN00044 20..557 CDD:165622 141/623 (23%)

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