DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment stw and LAC7

DIOPT Version :10

Sequence 1:NP_610170.2 Gene:stw / 35494 FlyBaseID:FBgn0286203 Length:784 Species:Drosophila melanogaster
Sequence 2:NP_187533.1 Gene:LAC7 / 820078 AraportID:AT3G09220 Length:567 Species:Arabidopsis thaliana


Alignment Length:613 Identity:167/613 - (27%)
Similarity:260/613 - (42%) Gaps:158/613 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   233 ERGILT-ANRMIPGPSIQVCENDKVVIDVENHMEGMEVTIHWHGIWQRGSQYYDGVPFVTQCPIQ 296
            :|.::| .|..:|||:|:|.|.|.:||.|.|| ....:|||||||:.:.:.:.||...:||||||
plant    42 KRQVITVVNGSLPGPTIRVKEGDSLVIHVLNH-SPHNITIHWHGIFHKLTVWADGPSMITQCPIQ 105

  Fly   297 QGNTFRYQW--TGNAGTHFWHAHTGLQKLDGLYGSVVVRQPPSRDPNSHLYDFDLTTH---IMLI 356
            .|..:.|::  ||..||.:||||....:.. :||::|:| |.|    .|.|.|. ..|   .:|.
plant   106 PGQRYAYRFNITGQEGTLWWHAHASFLRAT-VYGALVIR-PKS----GHSYPFP-KPHKEVPILF 163

  Fly   357 SDWLHED--AAERYPGRLAVNTGQDP---ESMLINGKGQFRDPNTGFMTNTPLEIFTITPGRRYR 416
            .:|.:.|  |.|    ..|:.||..|   ::..|||    |..|....:...:....:..|:||.
plant   164 GEWWNTDVVALE----EAAIATGVPPNNSDAYTING----RPGNLYPCSKDRMFSLNVVKGKRYL 220

  Fly   417 FRMINAFASVCPAQV--TIEGHGMTVIATDGEPVHPVDVNTIISFSGERYDFVISADQPVG-AYW 478
            .|:|||..::   |:  .|..|.:||:|.|.....|...:.|:...|:..|.::.|||.|. :|:
plant   221 LRIINAAMNI---QLFFKIANHRLTVVAADAVYTAPYVTDVIVIAPGQTIDALLFADQSVDTSYY 282

  Fly   479 IQLRGLGECGIRRAQQLAILRYARGPYQPASSPPTYDVGIPQGVVMNPLDAQCNRQRNDAICVSQ 543
                            :|...||..|..|..:..|      :||:.....::..|          
plant   283 ----------------MAAHPYASAPAVPFPNTTT------RGVIHYGGASKTGR---------- 315

  Fly   544 LKNALEIDRGILAEKPDVKIFLP--------FRFFV----------------YRAEDLF------ 578
                         .||.:...||        :||:.                |..|::.      
plant   316 -------------SKPVLMPKLPSFFDTLTAYRFYSNLTALVNGPHWVPVPRYVDEEMLVTIGLG 367

  Fly   579 ----QPNTYNRFLVASDADHLISLIDEVSYISPPSPMLSQYNDI------------PQEY-YCNG 626
                ..||......||.::|...|..::|.:.      :.::|:            |.:: |.|.
plant   368 LEACADNTTCPKFSASMSNHSFVLPKKLSILE------AVFHDVKGIFTADFPDQPPVKFDYTNP 426

  Fly   627 DNRPVDCG---ENCQCTHKIDVPLNAIVEVVLVDEVQQINISHPFHLHGTSFYVL--GLGR-SPD 685
            :....:.|   .....:.|| :..|..|||||.:.......|||.||||.:|:||  |.|. .|.
plant   427 NVTQTNPGLLFTQKSTSAKI-LKFNTTVEVVLQNHALIAAESHPMHLHGFNFHVLAQGFGNYDPS 490

  Fly   686 KQIQRMNLKHALELDQRGLLERQYLKPSLKDTVAVPNNGYAILRFRADNPGFWLFHCHFQYHIVI 750
            :...::||                :.|..::|:|||..|:|::||.|:|||.|:||||...|:..
plant   491 RDRSKLNL----------------VDPQSRNTLAVPVGGWAVIRFTANNPGAWIFHCHIDVHLPF 539

  Fly   751 GMNLVFQIGT----PNDLPPVPPNFPRC 774
            |:.::|.:..    ...|||.||:.|:|
plant   540 GLGMIFVVKNGPTKSTTLPPPPPDLPKC 567

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stwNP_610170.2 ascorbase 230..775 CDD:274555 167/613 (27%)
LAC7NP_187533.1 laccase 23..550 CDD:274556 160/594 (27%)

Return to query results.
Submit another query.