DRSC/TRiP Functional Genomics Resources

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Protein Alignment stw and LAC6

DIOPT Version :9

Sequence 1:NP_001137606.1 Gene:stw / 35494 FlyBaseID:FBgn0286203 Length:784 Species:Drosophila melanogaster
Sequence 2:NP_182180.1 Gene:LAC6 / 819269 AraportID:AT2G46570 Length:569 Species:Arabidopsis thaliana


Alignment Length:628 Identity:174/628 - (27%)
Similarity:264/628 - (42%) Gaps:113/628 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   191 RICYYHFTLEYYTV--LGAAC-----QVCTPNATNTVWSHCQCVLADGVERGILTANRMIPGPSI 248
            |:.:..|||:...:  :|||.     :|.|...|..    ||       ...|:|.|:..|||:|
plant    11 RLSFLLFTLQVMNIGRIGAATRFYQFKVQTIRLTRL----CQ-------TNEIVTVNKKFPGPAI 64

  Fly   249 QVCENDKVVIDVENHMEGMEVTIHWHGIWQRGSQYYDGVPFVTQCPIQQGNTFRYQW--TGNAGT 311
            ...|:|::||.|.| |.....|||||||.|:.|.:|||..::||||||.|.:|.|.:  ....||
plant    65 SAQEDDRIVIKVIN-MTPYNTTIHWHGIKQKRSCWYDGPSYITQCPIQSGQSFTYNFKVAQQKGT 128

  Fly   312 HFWHAHTGLQKLDGLYGSVVVRQPPSRDPNSHLYDF--DLTTHIMLISDWLHEDAAERYPGRLAV 374
            ..||||....:.. :||.::| .|.:..|    |.|  ....|.:|:.::..::..|.  .:..:
plant   129 FLWHAHFSWLRAT-VYGPLIV-YPKASVP----YPFKKPFNEHTILLGEYWLKNVVEL--EQHVL 185

  Fly   375 NTGQDP---ESMLINGKGQFRDPNTGFMTNTPLEIFTITPGRRYRFRMINAFASVCPAQVTIEGH 436
            .:|..|   ::..|||:   ..||....:....|| .|.|.:.|..|:|||..:: ....||..|
plant   186 ESGGPPPPADAFTINGQ---PGPNYNCSSKDVYEI-QIVPRKIYLLRLINAGINM-ETFFTIANH 245

  Fly   437 GMTVIATDGEPVHPVDVNTIISFSGERYDFVISADQPVGAYWIQLRGLGECGIRRAQQLAILRYA 501
            .:|::..|||...|.....::...|:..:.:::|||.||.|                     ..|
plant   246 RLTIVEVDGEYTKPYTTERVMLVPGQTMNILVTADQTVGRY---------------------SMA 289

  Fly   502 RGPYQPASSPP----------TYDVGIPQGVILNPLDAICDRKRADAVCVSNLKNAKKVDKGVLV 556
            .|||:.|.:..          .|...:|..|.:.....|.:...|....:..|::...||   :.
plant   290 MGPYESAKNVKFQNTSAIANFQYIGALPNNVTVPAKLPIFNDNIAVKTVMDGLRSLNAVD---VP 351

  Fly   557 ERPDVKIFLPFRFFVYEPKALFIPNTYNRFLVVPSGDHLTSLVDEISYISPPAPPL----SQID- 616
            ...|..:|:.....|.:..:   .|..|: ...|....|.:.::.||:|.|....|    .|:: 
plant   352 RNIDAHLFITIGLNVNKCNS---ENPNNK-CQGPRKGRLAASMNNISFIEPKVSILEAYYKQLEG 412

  Fly   617 ----DIP--PEYFCNGDNRPPNCGPN----CECTHMVDIPLGAIVEVVLVDEVQQVNLSHPFHLH 671
                |.|  ||...:..|..||...|    ...|..:....|:.::::..:.......:||.|||
plant   413 YFTLDFPTTPEKAYDFVNGAPNDIANDTQAANGTRAIVFEYGSRIQIIFQNTGTLTTENHPIHLH 477

  Fly   672 GTAFYVVGLGR-SPDKSIKKINLKHALELDQMGMLERHFSKPPLKDTIAVPNNGYVVIRFRADNP 735
            |.:|||:|.|. :.|:...|.||:                .||..:||.||..|:..|||.|:||
plant   478 GHSFYVIGYGTGNYDQQTAKFNLE----------------DPPYLNTIGVPVGGWAAIRFVANNP 526

  Fly   736 GYWLFHCHFLFHIVIGMNLIFHI----GTTADLPPVPPRFPTC 774
            |.||.||||..|...||:.:|.:    .....||..|...|.|
plant   527 GLWLLHCHFDIHQTWGMSTMFIVKNGKKVQESLPHPPADLPKC 569

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stwNP_001137606.1 ascorbase 230..756 CDD:274555 156/558 (28%)
CuRO_1_tcLCC2_insect_like 230..333 CDD:259927 43/104 (41%)
CuRO_2_tcLCC_insect_like 352..500 CDD:259951 34/150 (23%)
CuRO_3_tcLLC2_insect_like 599..767 CDD:259972 57/187 (30%)
LAC6NP_182180.1 laccase 29..569 CDD:274556 168/608 (28%)
CuRO_1_LCC_plant 34..150 CDD:259918 49/129 (38%)
CuRO_2_LCC_plant 165..312 CDD:259943 39/174 (22%)
CuRO_3_LCC_plant 413..552 CDD:259964 49/154 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 85 1.000 Domainoid score I2814
eggNOG 1 0.900 - - E1_COG2132
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D454773at2759
OrthoFinder 1 1.000 - - FOG0000424
OrthoInspector 1 1.000 - - mtm1062
orthoMCL 1 0.900 - - OOG6_100257
Panther 1 1.100 - - O PTHR11709
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X253
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
109.780

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