DRSC/TRiP Functional Genomics Resources

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Protein Alignment stw and LAC3

DIOPT Version :10

Sequence 1:NP_610170.2 Gene:stw / 35494 FlyBaseID:FBgn0286203 Length:784 Species:Drosophila melanogaster
Sequence 2:NP_180580.1 Gene:LAC3 / 817571 AraportID:AT2G30210 Length:570 Species:Arabidopsis thaliana


Alignment Length:635 Identity:157/635 - (24%)
Similarity:244/635 - (38%) Gaps:139/635 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   199 LEYYTVLGAACQ-----VCTPNATNTVWSHCQCVLADGVERGILTANRMIPGPSIQVCENDKVVI 258
            |.|:..|.:|..     |.||.....:....|.:          |.|...|||::.|...|.:.|
plant    16 LAYFAFLASAEHHVHQFVITPTPVKRLCRTHQSI----------TVNGQYPGPTLVVRNGDSLAI 70

  Fly   259 DVENHMEGMEVTIHWHGIWQRGSQYYDGVPFVTQCPIQQGNTFRYQW--TGNAGTHFWHAHTGLQ 321
            .|.|... ..::||||||.|..:.:.||..::|||||:.|.|:.|::  ....||.:||||:...
plant    71 TVINRAR-YNISIHWHGIRQLRNPWADGPEYITQCPIRPGQTYTYRFKIEDQEGTLWWHAHSRWL 134

  Fly   322 KLDGLYGSVVVRQPPSRDPNSHLYDFDLTTH--IMLISDWLHEDAAE-----RYPGRLAVNTGQD 379
            :.. :||:::: .|....|    |.|.:...  .:|:.:|...:..:     ::.| .|.|..  
plant   135 RAT-VYGALII-YPRLGSP----YPFSMPKRDIPILLGEWWDRNPMDVLKQAQFTG-AAANVS-- 190

  Fly   380 PESMLINGK--GQFRDPNTGFMTNTPLEIFTITPGRRYRFRMINA------FASVCPAQVTIEGH 436
             ::..|||:  ..:|....|.:.      |.|.||...:.|:|||      |.||.       .|
plant   191 -DAYTINGQPGDLYRCSRAGTIR------FPIFPGETVQLRVINAGMNQELFFSVA-------NH 241

  Fly   437 GMTVIATDGEPVHPVDVNTIISFSGERYDFVISADQPVGAYWIQLRGLGECG--IRRAQQLAILR 499
            ..||:.||.....|...|.|:...|:..:.:::|:|..|.|::..|......  .......|||:
plant   242 QFTVVETDSAYTKPFTTNVIMIGPGQTTNVLLTANQRPGRYYMAARAYNSANAPFDNTTTTAILQ 306

  Fly   500 YARGPYQPASS----PPTYDVGIPQGVVMNPLDAQCNRQRNDAICVSQLKNALEI-DRGILAEKP 559
            |...|.:....    .|.:.| :| |.             ||....:...|.|.. .|..:.::.
plant   307 YVNAPTRRGRGRGQIAPVFPV-LP-GF-------------NDTATATAFTNRLRYWKRAPVPQQV 356

  Fly   560 DVKIFLPFRFFVYRAEDLFQPNTY----NRFLVASDADHLISLIDEVSYISPPSPMLSQYNDIPQ 620
            |..:|......:....:...|...    .||..:         ::.:|::.|.|      |.:.|
plant   357 DENLFFTVGLGLINCANPNSPRCQGPNGTRFAAS---------MNNMSFVLPRS------NSVMQ 406

  Fly   621 EYY------CNGDNRPV-----DCGEN--------CQCTHKIDVPLNAIVEVVLVDEVQQINISH 666
            .||      ...|..||     |...|        .:.|....:...:.|::||.|.......:|
plant   407 AYYQGTPGIFTTDFPPVPPVQFDYTGNVSRGLWQPIKGTKAYKLKYKSNVQIVLQDTSIVTPENH 471

  Fly   667 PFHLHGTSFYVLGLG---RSPDKQIQRMNLKHALELDQRGLLERQYLKPSLKDTVAVPNNGYAIL 728
            |.||||..|||:|.|   .:|.....|.||                ..|..::|:..|..|:..:
plant   472 PMHLHGYQFYVVGSGFGNFNPRTDPARFNL----------------FDPPERNTIGTPPGGWVAI 520

  Fly   729 RFRADNPGFWLFHCHFQYHIVIGMNLVFQI----GTPNDLPPVPPNFPRC 774
            ||.|||||.|..|||...|:..|:.:||.:    |....:...|.:.|||
plant   521 RFVADNPGAWFMHCHIDSHLGWGLAMVFLVENGRGQLQSVQAPPLDLPRC 570

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stwNP_610170.2 ascorbase 230..775 CDD:274555 149/599 (25%)
LAC3NP_180580.1 laccase 25..570 CDD:274556 152/624 (24%)

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