DRSC/TRiP Functional Genomics Resources

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Protein Alignment stw and Hephl1

DIOPT Version :10

Sequence 1:NP_610170.2 Gene:stw / 35494 FlyBaseID:FBgn0286203 Length:784 Species:Drosophila melanogaster
Sequence 2:NP_001178922.2 Gene:Hephl1 / 500946 RGDID:1564835 Length:1159 Species:Rattus norvegicus


Alignment Length:882 Identity:168/882 - (19%)
Similarity:274/882 - (31%) Gaps:319/882 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 VANSQQN--QPKKENQP------------DLTPMGSFWQQHVATPSSSTPFDSPFFSATHGLVQT 83
            |.|.:.|  .||...|.            |.:|.|  :.:....|.:::..||..:     ..|.
  Rat   362 VGNCRGNAPHPKMRGQQRRYFIAAEKVLWDYSPQG--YDKFTGFPLNTSGSDSAVY-----FTQA 419

  Fly    84 HPSIGGSH-------SGPAPLNGNSLGSGAPSSI-LAGTKPALTAGSG------YLNSRGS---- 130
            ...|||.:       ...|..:...:.|.:.:.: :.|  |.:.|..|      :.|....    
  Rat   420 DNRIGGKYWKARYTEYVDATFSRRKMPSDSEAHLGILG--PVIKAEVGDILLVTFANKADKVYSI 482

  Fly   131 LPTSARYPANKITGTVVEPNPKSPFRHLDFSTSATAELRRNPALSAPDECARACREGEPPRICYY 195
            ||....|......|..|:...| |..|:....:.|.......::|..|:        :||.:.|.
  Rat   483 LPHGVFYDKASDAGPNVDGFLK-PGAHVKPGETFTYRWTVPESVSPTDD--------DPPCLTYL 538

  Fly   196 HFTL-----EYYTVLGAACQVCTPNATNTVWSHCQCVLADGVERGI------------------- 236
            :|:.     :....|.....||.....|          |||.::||                   
  Rat   539 YFSAVQPIKDTSAGLVGPLLVCKKGTLN----------ADGTQKGIDKEFYLLFTVFDENFSSYL 593

  Fly   237 ---------------------LTANRM--IPG------PSIQVCENDKVVIDVENHMEGMEVTIH 272
                                 :.:|||  |.|      |.:.:|:.|:    |..|:.||.....
  Rat   594 DENIQKFTWHPFSVDKEDKEFVKSNRMHAINGYMYGNQPGLSMCKKDR----VSWHLIGMGTDTD 654

  Fly   273 WHGIWQRGSQYYDGVPFVTQCPIQQGNTFRYQWTGNAGTH------FWHA---------HTGLQK 322
            .||:      |:            ||||...:     |||      |.|.         |:|:.|
  Rat   655 MHGV------YF------------QGNTIHLR-----GTHRDSLALFPHMSTTAFMQPDHSGIFK 696

  Fly   323 L---------DGLYGSVVVRQPPSRDPNSHLYDFDLTTHIMLISDWLHEDAAERYPGRLAVNTGQ 378
            :         .|:.....|....:|||:...|....|.:|          |||......|.|...
  Rat   697 VFCSTLHHFTRGMGQIYEVSSCGNRDPSEPPYGMLRTFYI----------AAEEVEWDYAPNKNW 751

  Fly   379 DPESMLINGKGQFRDPNTGFMTNTPLEIFTITPGRRYRFRMINAFAS-------VCPAQVTIEGH 436
            :.|...::..|: |..:. ||.:|...|     |.:||..:...:.:       ..|.|   |.|
  Rat   752 EFEKQHLDAGGE-RHGDI-FMNHTENWI-----GSQYRKVVYREYTNGEFVEIKARPPQ---EEH 806

  Fly   437 ----GMTVIATDGEPVHPVDVNTIISFSGERYDFVISADQPVGAYWIQLRGLGECGIRRAQQLAI 497
                |..:.|..|:.:       :|.|..:       |.:|   |.|..:|:.:....:...:  
  Rat   807 LQLLGPMIHAEVGDSI-------LIIFKNK-------ASRP---YSITAQGVEDSDSGKFLDV-- 852

  Fly   498 LRYARGPYQPASSP---PTYDVGIPQGVVMNPLDAQCNRQRNDAICVSQLKNALEIDRGILAEKP 559
                     |.:.|   .||...:|:.....|.|..|                            
  Rat   853 ---------PVTKPGEIKTYRWNVPKRSGPGPSDPNC---------------------------- 880

  Fly   560 DVKIFLPFRFFVYRAEDLFQPNTYNRFL---------------VASDADHLISLI------DEVS 603
                 :|   :||.:...|..:||:..:               ..||.|:..:|:      :|..
  Rat   881 -----IP---WVYFSTANFVKDTYSGLMGPLITCREGVLNEKGRRSDVDYEFALLFLVFNENESW 937

  Fly   604 YISPPSPMLSQY-NDIPQEYYCNGDNRPVDCGENCQCTHKIDVPLNAIVEVVLVDEVQQINISHP 667
            |:   ...:.:| |..|:::      |..|..|.....|.|:..:...:..:::.|...      
  Rat   938 YL---DDNIKKYLNKDPRDF------RHTDDFEESNRMHAINGKIFGNLPGLIMTEDSM------ 987

  Fly   668 FHLHGTSFYVLGLGRSPDKQIQRMNLKHALELDQRGLLERQYLKPSLKDTV--AVPNNGYAILRF 730
                 |::|:||:|...|        .|.:.......|.:  :..|.::.|  ..|.....|..|
  Rat   988 -----TNWYLLGIGSEVD--------IHTIHYHAESFLFK--IDKSYREDVYDLFPGTFQTIELF 1037

  Fly   731 RADNPGFWLFHCHFQYHIVIGMNLVFQI--GTPNDLP 765
             ||:||.||.|||...||..||...:.:  ...|.:|
  Rat  1038 -ADHPGTWLLHCHVSDHIHAGMETTYTVLRNIDNRIP 1073

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stwNP_610170.2 ascorbase 230..775 CDD:274555 125/648 (19%)
Hephl1NP_001178922.2 CuRO_1_ceruloplasmin 26..208 CDD:259884
CuRO_2_ceruloplasmin 222..362 CDD:259907 168/882 (19%)
CuRO_3_ceruloplasmin 376..572 CDD:259886 40/223 (18%)
CuRO_4_ceruloplasmin 575..718 CDD:259908 29/169 (17%)
Cupredoxin 732..907 CDD:473140 45/258 (17%)
Cupredoxin 923..1065 CDD:473140 38/172 (22%)
Blue background indicates that the domain is not in the aligned region.

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