DRSC/TRiP Functional Genomics Resources

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Protein Alignment stw and Mco4

DIOPT Version :9

Sequence 1:NP_001137606.1 Gene:stw / 35494 FlyBaseID:FBgn0286203 Length:784 Species:Drosophila melanogaster
Sequence 2:NP_573249.1 Gene:Mco4 / 326221 FlyBaseID:FBgn0052557 Length:645 Species:Drosophila melanogaster


Alignment Length:649 Identity:209/649 - (32%)
Similarity:319/649 - (49%) Gaps:102/649 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   163 SATAELRRNPALSAPDECARACREGEPPRICYYHFTLEYYTVLGAACQ----------------- 210
            :|..:.:|:|       |.|.|.: :.|..|||:..:.|...:...|:                 
  Fly    57 AAEKDNQRHP-------CRRDCAD-KQPMTCYYYMVVHYDDTMAETCKRYLQSKFRFKLSGKEYI 113

  Fly   211 ----VCTPNATNTVWSHCQCVLADGVERGILTANRMIPGPSIQVCENDKVVIDVENHMEGMEVTI 271
                :.|..|.|.     .|..|||:|..::..|..:||.:|:||..|.||.||.|.|. ...||
  Fly   114 DGIALATQLAAND-----DCKYADGLESEVMVVNGQLPGMNIEVCYGDTVVADVINSMH-ETTTI 172

  Fly   272 HWHGIWQRGSQYYDGVPFVTQCPIQQGNTFRYQW-TGNAGTHFWHAHTGLQKLDGLYGSVVVRQP 335
            ||||:.||.:.:.||||.|||.||:.|..|||:: ..:.||::||:||..|:..||.|.:|||.|
  Fly   173 HWHGMHQRLTPFMDGVPHVTQYPIEAGQAFRYRFEVDHGGTNWWHSHTEHQRAFGLAGPLVVRMP 237

  Fly   336 PSRDPNSHLYDFDLTTHIMLISDWLH---EDAAERYPGRLAVNTGQDPESMLINGKGQFRDPNTG 397
            |..:|::||||||::.|:::|.||:|   |..|               |::||||:|  |:...|
  Fly   238 PKLNPHAHLYDFDMSEHVIMIQDWVHNFVESVA---------------ENILINGRG--RNLKKG 285

  Fly   398 FMTNTP--LEIFTITPGRRYRFRMINAFASVCPAQVTIEGHGMTVIATDGEPVHPVDVNTIISFS 460
            .....|  ...|.:..|.|||||:|....|.||...:|:.|.:.|||:||..:.||:|..|:...
  Fly   286 VKAAKPTLYAHFPVVRGGRYRFRVIFNGVSNCPISFSIDKHDLVVIASDGNDIEPVEVQRIMFHG 350

  Fly   461 GERYDFVISADQPVGAYWIQLRGLGECGIRRAQQLAILRYARGPYQPASSPP---TYDVGIPQGV 522
            .||:|||:.|:|.|..|||:::|...|...:..|.|:|.|.....:...:..   .||.   .|.
  Fly   351 AERFDFVLHANQEVSNYWIRVKGYSFCAKNQLHQEAVLHYRDADTRALDTHTLSYAYDA---PGK 412

  Fly   523 ILNPL-DAICDRKRADAVCVSNLKNAKKVDKGVLVERPDVKIFLPFRFFVYEPKALFIPNTYNRF 586
            .||.| |.....:..:::.::|| ||         :||:.::.....|:          .:.|.|
  Fly   413 TLNELGDDASGARAGNSISLANL-NA---------QRPEPEVAPSVTFY----------TSMNAF 457

  Fly   587 LVVPSGDHLTSLVDEISYISPPAPPLSQIDDI-PPEYFCNGDNRPP---NCGP-NCECTHMVDIP 646
             .|..|:.....:|:||: |.|...|.|..:: ..::|||...:..   ||.. :|:|::::.:|
  Fly   458 -EVRQGEGFRFQMDDISF-SMPKMSLLQTRNLGVGQFFCNRSQQADLGFNCRQRHCQCSNVIQVP 520

  Fly   647 LGAIVEVVLVDEVQQVNLSHPFHLHGTAFYVVGLGRSPDKSIKKINLKHALELDQMGMLERHFSK 711
            ....||.| :..:.|.  .||.||||..|.|||:|...::.|.:|.     ::|:...|.|....
  Fly   521 ANQQVEFV-ISSLSQT--PHPIHLHGYTFRVVGMGVLGEQKIGQIE-----QIDKKTPLPRRAKG 577

  Fly   712 PPLKDTIAVPNNGYVVIRFRADNPGYWLFHCHFLFHIVIGMNLIFHIGTTADLPPVPPRFPTCG 775
            .||||::.||..||.::||.:::||||:||||...|...||..:..:|...::...|  ...||
  Fly   578 APLKDSVQVPAFGYTILRFYSNSPGYWMFHCHISPHSENGMAAVVRVGEDVEMKMCP--VSNCG 639

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stwNP_001137606.1 ascorbase 230..756 CDD:274555 188/540 (35%)
CuRO_1_tcLCC2_insect_like 230..333 CDD:259927 48/103 (47%)
CuRO_2_tcLCC_insect_like 352..500 CDD:259951 54/152 (36%)
CuRO_3_tcLLC2_insect_like 599..767 CDD:259972 57/172 (33%)
Mco4NP_573249.1 ascorbase 132..626 CDD:274555 188/544 (35%)
CuRO_1_tcLCC2_insect_like 132..235 CDD:259927 48/103 (47%)
CuRO_2_tcLCC_insect_like 253..390 CDD:259951 54/153 (35%)
CuRO_3_tcLLC2_insect_like 468..633 CDD:259972 57/173 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 120 1.000 Domainoid score I1881
eggNOG 1 0.900 - - E1_COG2132
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 210 1.000 Inparanoid score I2375
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG58299
OrthoDB 1 1.010 - - D257925at33208
OrthoFinder 1 1.000 - - FOG0000424
OrthoInspector 1 1.000 - - mtm1062
orthoMCL 1 0.900 - - OOG6_100257
Panther 1 1.100 - - P PTHR11709
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X253
1110.880

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