DRSC/TRiP Functional Genomics Resources

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Protein Alignment stw and f5

DIOPT Version :10

Sequence 1:NP_610170.2 Gene:stw / 35494 FlyBaseID:FBgn0286203 Length:784 Species:Drosophila melanogaster
Sequence 2:XP_002935820.2 Gene:f5 / 100135376 XenbaseID:XB-GENE-987398 Length:2011 Species:Xenopus tropicalis


Alignment Length:699 Identity:135/699 - (19%)
Similarity:211/699 - (30%) Gaps:228/699 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 PSSILAGTKPALTAGSGYLNSRGSLPTSARYPANKITGTVVEPNPKSPFRHLDFSTSATAELRRN 171
            |..:..|.|           |.|:..|.:..|..|:..:|:      |.:...:....|.|:   
 Frog   110 PQGVAYGKK-----------SEGAKYTDSTLPYEKLDDSVM------PGQMYTYIWEITEEI--- 154

  Fly   172 PALSAPDECARACREGEPPRICYYHFTL--EYYTVLGAACQVCTPNATNTV-------------- 220
                .|.|...||.    ..|.|.|..:  ::.:.|..|..:|...:.|.|              
 Frog   155 ----GPKEYDPACL----TNIYYSHENMVQDFNSGLIGALLICKKGSLNEVGEQRHFDKEYVLMF 211

  Fly   221 --------WSHCQCVLADGVERGILTANRMIPG--PSIQVCENDKVVIDVENHMEGME-----VT 270
                    |.:    |.|.....:.:.|..:.|  |.|..|..|    .|..|:.||.     .:
 Frog   212 AVFDENKSWQN----LNDKEHSVMYSINGYVNGTIPDIYACAGD----SVSWHLLGMSSEPEFFS 268

  Fly   271 IHWHGIWQRGSQYYDGVPFVTQCPIQQGNTFRYQWTGNAGTHFWHAHTGLQK--LDGLYGSVVVR 333
            ||:.|.....:|:...|..:........|...|| ||.     |...:.::|  ..|::|.:.|:
 Frog   269 IHFFGQTLEENQHKVSVVGLVASSSTTANMTIYQ-TGK-----WLITSLVEKHFEAGMHGYIEVQ 327

  Fly   334 QPPSRDPNSHLYDFDLTTHIMLISDWLHEDAAER-----YPGRL----AVNTGQDPESMLINGKG 389
              |..|.........|... ..|..|.:..|||.     .|.::    .:|..|..:.:|..   
 Frog   328 --PCSDKGYTAPKLSLLQK-RFIKVWEYFIAAEEEEWNYVPSKVENTDKINCQQKYKKVLYK--- 386

  Fly   390 QFRDPNTGFMTNTPLEIFT------ITPGRRYRFR--MINAFASVCPAQVTIEGHGMTVIATDGE 446
                   .:..||..::.|      :.|..|.:.|  :...|.:......:|..||::|......
 Frog   387 -------AYSDNTFTKLLTAGNEGLLGPVIRAQVRDTITVVFKNKAKRPYSIYPHGVSVQKAYEG 444

  Fly   447 PVHPVDVNTIISFSGERYDFVISADQPVGAYWIQLRGLGECGIRRAQQLAILRYARGP------Y 505
            ..:|.|:.     ..|..:..:...:.|..||         .|....:.|    ||.|      |
 Frog   445 ASYPPDIR-----GNETQNQAVMPGETVTYYW---------NILETDEPA----ARDPRCLTRMY 491

  Fly   506 QPASSPPTYDVGIPQGV---VMNPLDAQCNRQRNDAICVSQLKNALEIDRGILAEKPDVKIFLPF 567
            ..|       |.|.:.:   ::.||          .||.|...|.    ||: .||.|::....|
 Frog   492 HSA-------VNITKDIASGLIGPL----------LICKSMSLNT----RGV-QEKADLEQIATF 534

  Fly   568 RFFVYRAEDLFQPNTYNRFLVASDADHLISLIDEVSYISPPSPMLSQYNDIPQEYYCNG---DNR 629
            ..|..........|........::        |:..|.|        :|.||.   .||   ::.
 Frog   535 ALFDENKSWYHNENKLKHCHAVNN--------DQTEYYS--------HNIIPT---INGYAFESA 580

  Fly   630 PVD-CGENCQCTHKIDVPLNAIVEVVLVDEVQQINIS-HPFHLHGTSFYVLGLGRSPDKQIQRMN 692
            |:. |.......|        |..|...||:..:::| |.....|.|                  
 Frog   581 PLGFCHSQVIHWH--------ISSVGAQDEIIGVHLSGHTLRYKGKS------------------ 619

  Fly   693 LKHALELDQRGLLERQYLKPSLKDTVAV-PNNGYAILRFRADNPGFWLF 740
                                  :|||.: |.:|.:| ....||.|.|||
 Frog   620 ----------------------EDTVNIFPMSGESI-SVDMDNLGLWLF 645

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stwNP_610170.2 ascorbase 230..775 CDD:274555 109/552 (20%)
f5XP_002935820.2 CuRO_1_FV_like 32..192 CDD:259888 22/109 (20%)
CuRO_2_FV_like 204..326 CDD:259995 27/135 (20%)
CuRO_3_FV_like 348..514 CDD:259992 38/210 (18%)
CuRO_4_FV_like 527..666 CDD:259996 35/187 (19%)
PTZ00112 775..>1084 CDD:240274
235kDa-fam <938..>1249 CDD:130673
CuRO_5_FV_like 1368..1543 CDD:259993
CuRO_6_FV_like 1555..1694 CDD:259997
FA58C 1702..1849 CDD:238014
FA58C 1857..2008 CDD:238014
Blue background indicates that the domain is not in the aligned region.

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