DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10417 and PTC3

DIOPT Version :9

Sequence 1:NP_610169.1 Gene:CG10417 / 35492 FlyBaseID:FBgn0033021 Length:662 Species:Drosophila melanogaster
Sequence 2:NP_009497.2 Gene:PTC3 / 852224 SGDID:S000000152 Length:468 Species:Saccharomyces cerevisiae


Alignment Length:674 Identity:150/674 - (22%)
Similarity:214/674 - (31%) Gaps:317/674 - (47%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGAYLSHPKTDKTSTDQFNELLAVGASSMQGWRNSQEDAH----NSILNFD-NNTSFFAVYDGHG 60
            ||..||:|..||......:.|.|.|..:|||||.|.||||    |.:...| .:.:|:.::||||
Yeast     1 MGQILSNPIIDKEHHSGTDCLTAFGLCAMQGWRMSMEDAHIVEPNLLAESDEEHLAFYGIFDGHG 65

  Fly    61 GAEVAQYCADKLPHFLKNLETYKNGQFEVALKEAFLGFDKTLLDPSIVSILKILAGEHNFVDAEA 125
            |:.||::|..|:...||..|::|:|..|..|.:.||..|..||                      
Yeast    66 GSSVAEFCGSKMISILKKQESFKSGMLEQCLIDTFLATDVELL---------------------- 108

  Fly   126 DDYEEEDLAELQEESNLPLNEVLEKYKGLPQKKDLDLKSSDHKENFKMRSPYFRGRRAAALAAEA 190
                                                                             
Yeast   109 ----------------------------------------------------------------- 108

  Fly   191 TNKAVMDPSAKPDGSSTSAAAAAAALSADGVANSRNPSNVVNPMAGADSNTTTSINDLSTKNAAL 255
                                                                        |:..|
Yeast   109 ------------------------------------------------------------KDEKL 113

  Fly   256 KDDSVNDQNEGSNGTDFKHTLVSSSNKKLFATGSNDMTELNQSSKNEFTNSSTSKEFERNINSSQ 320
            |||                                                              
Yeast   114 KDD-------------------------------------------------------------- 116

  Fly   321 DDEFTDDDADYEENDNVKSPDTSSAESSDCTENDDDGDEDGNEDSDEEETDEDQMANDNFCANMI 385
                                                                             
Yeast   117 ----------------------------------------------------------------- 116

  Fly   386 EEPGKDSGCTAVVCLL-QGRDLYV-ANAGDSRCVISRSGQAIEMSIDHKPEDDEEASRIIKAGGR 448
                 .|||||.|.|: |.:.|.: ||:||||.|:|..|.:..||.||||....|.|||:.|.|.
Yeast   117 -----HSGCTATVILVSQLKKLLICANSGDSRTVLSTGGNSKAMSFDHKPTLLSEKSRIVAADGF 176

  Fly   449 VTLDGRVNGGLNLSRALGDHAYKTNVTLPAEEQMISALPD-IKKLIITPEDEFMVLACDGIWNYM 512
            |.:| ||||.|.||||:||..:|:|..|...||:::.:|| |...:...||||::|||||||:.:
Yeast   177 VEMD-RVNGNLALSRAIGDFEFKSNTKLGPHEQVVTCVPDIICHNLNYDEDEFVILACDGIWDCL 240

  Fly   513 SSEEVVEFVRCRL-KDNKKLSTICEELFDNCLAPNTMGDGTGCDNMTAVIVQFKKKLQELQSTIP 576
            :|:|.|:.|...: :.|..||.|...:.|.|.:|.|.|.|.|||||:..||...|:         
Yeast   241 TSQECVDLVHYGISQGNMTLSDISSRIVDVCCSPTTEGSGIGCDNMSISIVALLKE--------- 296

  Fly   577 PNQTEDKLLKTSENVSHSLNDQSASKRCA----SQNADADDEIL-------------EKNNSKRL 624
             |::|.:..:...:.::::......:|.:    ...:|.|:|:.             .|:|....
Yeast   297 -NESESQWFERMRSKNYNIQTSFVQRRKSIFDFHDFSDDDNEVFAITTKKLQDRLNRSKDNDDME 360

  Fly   625 KTDLEQENIKDRTPSPSNQNEDPT 648
            ..||:.|.....|||..: .||.|
Yeast   361 IDDLDTELGSSATPSKLS-GEDRT 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10417NP_610169.1 PP2Cc 18..>100 CDD:214625 34/86 (40%)
PP2Cc <374..564 CDD:238083 83/193 (43%)
PTC3NP_009497.2 PP2C 23..280 CDD:395385 116/536 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157344429
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0631
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 233 1.000 Inparanoid score I716
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100270
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.690

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