DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10417 and PTC6

DIOPT Version :9

Sequence 1:NP_610169.1 Gene:CG10417 / 35492 FlyBaseID:FBgn0033021 Length:662 Species:Drosophila melanogaster
Sequence 2:NP_010003.2 Gene:PTC6 / 850441 SGDID:S000002133 Length:442 Species:Saccharomyces cerevisiae


Alignment Length:454 Identity:96/454 - (21%)
Similarity:145/454 - (31%) Gaps:129/454 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   229 NVVNPMAGADSNTTTSINDLSTK-NAALK-------------DDSVNDQNEGSNGTDFKHTLVSS 279
            :::..:.|...:.|:.||.|..: |.::|             :.||.| ..|..|......|...
Yeast    21 DLLRGLPGYVGHATSRINRLENQDNYSIKMMRSWPNAYGSALNCSVFD-GHGEKGAQLSQLLADK 84

  Fly   280 SNKKL-FATGS---NDMTELNQSSKNEFTNSSTSKE----FERNINSSQDDEFTDDDADYEENDN 336
            ....| |...|   .|:.:|.|.....|...:..|.    ||:..|.            :.:|.|
Yeast    85 LCSSLDFPEPSWDKQDLKKLVQEYARRFPEGNYWKHKLSTFEKFYNK------------FIKNCN 137

  Fly   337 VKSPDTSSAESSDCTENDDDG----DEDGN--------EDSDE-------EETDEDQMANDNFCA 382
            .|.......|........:.|    |:.||        .:.|.       ...|.||      |.
Yeast   138 SKQELLLMKEGDSAILGQNGGRMIFDKMGNIIDKIALLTELDRLRLFYGFARFDLDQ------CC 196

  Fly   383 NMIEEPGKDSGCTAVVCLL-----------QGRD-------------LYVANAGDSRCVI-SRSG 422
            .:    |..:|.||....|           :|:|             |.|...|||:.:: .:.|
Yeast   197 GL----GTAAGSTASSIFLYPYDDPNAPIDEGKDDDSWIISHSGLLKLIVTQVGDSKIILCDQDG 257

  Fly   423 QAIEMSIDHKPEDDEEASRIIKAGGRVTLDG----RVNGGLNLSRALGDHAYKTNVTLPAEEQMI 483
            .|..::..|......|..|:.....|:..|.    |.......:|:.||.|.|        ...|
Yeast   258 IAHALTTTHHINSSRERHRLSIDPSRLDPDAFGETRFLNNFANTRSFGDVAGK--------PYGI 314

  Fly   484 SALPDI----------------KKLIITPEDEFMVLACDGIWNYMSSEEVVEFVRCRLKD-NKKL 531
            |:.|||                .||....::.|:.|..|||.|.::.:|||:.:...:.. ..|.
Yeast   315 SSEPDIFSFLVGNTLHLPRSERSKLPFNGDECFLALVTDGITNKLADQEVVDLITSTVNSWGLKK 379

  Fly   532 ST---ICEELFDNCLAPNTMGDGTGCDNMTAVIVQFKK--KLQELQSTIPPNQTEDKLLKTSEN 590
            :|   :.||......|..|...    ||.|.|:|:...  ....:..|.|  |.|.||:....|
Yeast   380 ATPQFVAEETIKFIQAIATKHS----DNATCVVVRLSNWGNWPNVDRTGP--QRETKLMNAQSN 437

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10417NP_610169.1 PP2Cc 18..>100 CDD:214625
PP2Cc <374..564 CDD:238083 54/238 (23%)
PTC6NP_010003.2 PP2C 108..401 CDD:395385 65/322 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0631
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.