DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10417 and POL

DIOPT Version :10

Sequence 1:NP_610169.1 Gene:CG10417 / 35492 FlyBaseID:FBgn0033021 Length:662 Species:Drosophila melanogaster
Sequence 2:NP_850463.1 Gene:POL / 819306 AraportID:AT2G46920 Length:856 Species:Arabidopsis thaliana


Alignment Length:645 Identity:122/645 - (18%)
Similarity:206/645 - (31%) Gaps:232/645 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGAYLSHPKTDKTSTDQFNELLAVG----------ASSMQGWRNSQ-------EDAHNSILNFDN 48
            |..:..||:|..:        .|||          .|.::..||.|       ||..:.:|:.:.
plant   242 MHRFFLHPETRVS--------WAVGKDGKLHGEDPESCLESNRNLQWAHGKAGEDRVHVVLSEEQ 298

  Fly    49 NTSFFAVYDGHGGAEVAQYCADKLPHFLKNLETYKNG---QFEVALKEAFLGFD------KTLLD 104
            ...|..:|||..|.:...:.   :.|..|.::....|   .:|...::..|..|      :.:.|
plant   299 GWLFIGIYDGFSGPDAPDFV---MSHLYKAIDKELEGLLWDYEEPSEDNQLQPDQEPPTEENMCD 360

  Fly   105 PSIVSILKILAGEHN-FVDAEADDYEEEDLAELQE-----------------ESNLPLNEV--LE 149
            |..:|      .:|: .|.||:::...:|::.|..                 :.::.|.|:  ||
plant   361 PESIS------EQHSKSVVAESEEVMIDDISSLGNTDTQIADGPPGDSAGPGKKSMRLYELLQLE 419

  Fly   150 KYKGLPQKKDLDLKSSDHKENFKMRSPYFRGRRAAALAAEATNKAVMDPSAKPDGSSTSAAAAAA 214
            :::|    :::.||                 |....:|.......|.:||....|:.........
plant   420 QWEG----EEIGLK-----------------RYGGNVALNNMTNQVENPSTSGGGAGNDPCTTDR 463

  Fly   215 ALSADGVANSRNPSNVVNPMAGADSNTTTSINDLSTKNAALKDDSVNDQNEGSNGTDFKHTLVSS 279
            : :.||:.||......      ..|..::.|..:..|..:|:                       
plant   464 S-ALDGIPNSGQRHGT------KKSQISSKIRRMYQKQKSLR----------------------- 498

  Fly   280 SNKKLFATGSNDMTELNQSSKNEFTNSSTSKEFERNINSSQDDEFTDDDADYEENDNVKSPDTSS 344
              ||||....:...|.....:.:...|  |....|..:.:.|            :|.|......:
plant   499 --KKLFPWSYDWHREEGICVEEKIVES--SGPIRRRWSGTVD------------HDAVLRAMARA 547

  Fly   345 AESSDCTENDDDGDEDGNEDSDEEETD-EDQMANDNFCANMIEEPGKDSGCTAVVCLLQGRDLYV 408
            .||:          |:...|..|:..| ..::|....|              .:|.|::.:|:||
plant   548 LEST----------EEAYMDMVEKSLDINPELALMGSC--------------VLVMLMKDQDVYV 588

  Fly   409 ANAGDSRCVI-----------------------SRSGQ--------------------------- 423
            .|.||||.::                       |||.:                           
plant   589 MNVGDSRAILAQERLHDRHSNPGFGNDEGIGHKSRSRESLVRIELDRISEESPIHNQATPISVSN 653

  Fly   424 -------------AIEMSIDHKPEDDEEASRIIK---AGGRVTLDGRVNGGLNLSRALGDHAYKT 472
                         |:::|.||....:||..||..   ...:..|..||.|.|.::||.|....|.
plant   654 KNRDVTSYRLKMRAVQLSSDHSTSVEEEIWRIRSEHPEDDQSILKDRVKGQLKVTRAFGAGFLKK 718

  Fly   473 -----------NVTLPAEEQMISALPDIKKLIITPEDEFMVLACDGIWNYMSSEEVVEFV 521
                       .|.....:..|:..|......:|..|.||||:.||::.|.|:||||..|
plant   719 PNFNEALLEMFQVEYIGTDPYITCEPCTVHHRLTSSDRFMVLSSDGLYEYFSNEEVVAHV 778

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10417NP_610169.1 PP2Cc 18..>100 CDD:214625 21/107 (20%)
PP2Cc <374..564 CDD:238083 50/225 (22%)
POLNP_850463.1 PP2Cc 273..>342 CDD:214625 15/71 (21%)
PP2Cc <534..835 CDD:238083 59/281 (21%)

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