DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10417 and alph

DIOPT Version :9

Sequence 1:NP_610169.1 Gene:CG10417 / 35492 FlyBaseID:FBgn0033021 Length:662 Species:Drosophila melanogaster
Sequence 2:NP_651701.1 Gene:alph / 43481 FlyBaseID:FBgn0086361 Length:374 Species:Drosophila melanogaster


Alignment Length:649 Identity:143/649 - (22%)
Similarity:201/649 - (30%) Gaps:301/649 - (46%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGAYLSHPKTDKTSTDQFNELLAVGASSMQGWRNSQEDAHNSILNFDN---NTSFFAVYDGHGGA 62
            ||.:|..|||.|.:.:.....|..|.|||||||:..|||:.:.....:   :.|||||:|||.|.
  Fly     1 MGGFLDKPKTAKHNDEGEGNKLLFGVSSMQGWRSEMEDAYYARAGLGDALPDWSFFAVFDGHAGC 65

  Fly    63 EVAQYCADKLPHFLKNLETYKNGQFEVALKEAFLGFDKTLLDPSIVSILKILAGEHNFVDAEADD 127
            :|:::||                              |.||: ||:|..:.:.|:|         
  Fly    66 KVSEHCA------------------------------KHLLE-SIISTEEFIGGDH--------- 90

  Fly   128 YEEEDLAELQEESNLPLNEVLEKYKGLPQKKDLDLKSSDHKENFKMRSPYFRGRRAAALAAEATN 192
                                   .||:                                      
  Fly    91 -----------------------VKGI-------------------------------------- 94

  Fly   193 KAVMDPSAKPDGSSTSAAAAAAALSADGVANSRNPSNVVNPMAGADSNTTTSINDLSTKNAALKD 257
                                                                      :...|:.
  Fly    95 ----------------------------------------------------------RTGFLRI 101

  Fly   258 DSVNDQNEGSNGTDFKHTLVSSSNKKLFATGSNDMTELNQSSKNEFTNSSTSKEFERNINSSQDD 322
            |.|                               |.||                          .
  Fly   102 DEV-------------------------------MREL--------------------------P 109

  Fly   323 EFTDDDADYEENDNVKSPDTSSAESSDCTENDDDGDEDGNEDSDEEETDEDQMANDNFCANMIEE 387
            |||                   .||..|                                     
  Fly   110 EFT-------------------RESEKC------------------------------------- 118

  Fly   388 PGKDSGCTAVVCLLQG-RDLYVANAGDSRCVISRSGQAIEMSIDHKPEDDEEASRIIKAGGRVTL 451
                 |.|..||...| ..:|:||.||||.|:.|.|..:..:.||||...||..||..|||.|.:
  Fly   119 -----GGTTAVCAFVGLTQVYIANCGDSRAVLCRQGVPVFATQDHKPILPEEKERIYNAGGSVMI 178

  Fly   452 DGRVNGGLNLSRALGDHAYKTNVTLPAE-EQMISALPDIKKLIITPEDEFMVLACDGIWNYMSSE 515
            . ||||.|.:||||||:.:| ||....: ||::|..|:|........|||:||||||||:.||:|
  Fly   179 K-RVNGTLAVSRALGDYDFK-NVKEKGQCEQLVSPEPEIFCQSRQDSDEFLVLACDGIWDVMSNE 241

  Fly   516 EVVEFVRCRLKDNKKLSTICEELFDNCLAPNTMGDGTGCDNMTAVIVQFKKKLQELQSTIPPNQT 580
            :|..|:..|::....|.:|..::.|.||...:.      |||:.:|:.|....:..:..|   :.
  Fly   242 DVCSFIHSRMRVTSNLVSIANQVVDTCLHKGSR------DNMSIIIIAFPGAPKPTEEAI---EA 297

  Fly   581 EDKLLKTSENV------SHSLNDQSASKRCASQNADADDEILEKNNSKRLKTDLEQENIKDRTP 638
            |.:|.|..|.:      |..:.|.....:|. ||.| |.|.|......:.|..:.:...|...|
  Fly   298 EHRLEKQIEKITRDEIESSKITDYVDLLKCL-QNRD-DIEGLPPGGGLQSKYHVIERTFKQEFP 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10417NP_610169.1 PP2Cc 18..>100 CDD:214625 24/84 (29%)
PP2Cc <374..564 CDD:238083 72/191 (38%)
alphNP_651701.1 PP2Cc 24..284 CDD:238083 117/544 (22%)
PP2C_C 278..352 CDD:285117 17/78 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45445107
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0631
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D957254at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100270
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.650

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